Detailed information NTG0513499

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: I6G33_RS12555
• Genome accession: NZ_CP065721
• Coordinates: 2619276..2620340 (-)
• Length: 354 a.a.
• NCBI ID: WP_102829001.1
• Uniprot ID: -
• Organism: Stutzerimonas degradans strain FDAARGOS_876
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2614276..2625340

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6G33_RS12530 (I6G33_12530)	aroK	2614879..2615424 (-)	546	WP_102828997.1	shikimate kinase AroK	-
I6G33_RS12535 (I6G33_12535)	pilQ	2615429..2617504 (-)	2076	WP_102828998.1	type IV pilus secretin PilQ	Machinery gene
I6G33_RS12540 (I6G33_12540)	pilP	2617560..2618087 (-)	528	WP_102828999.1	type 4a pilus biogenesis lipoprotein PilP	-
I6G33_RS12545 (I6G33_12545)	pilO	2618084..2618707 (-)	624	WP_102829000.1	type 4a pilus biogenesis protein PilO	-
I6G33_RS12550 (I6G33_12550)	pilN	2618704..2619276 (-)	573	WP_043297920.1	type 4a pilus biogenesis protein PilN	-
I6G33_RS12555 (I6G33_12555)	pilM	2619276..2620340 (-)	1065	WP_102829001.1	pilus assembly protein PilM	Machinery gene
I6G33_RS12560 (I6G33_12560)	-	2620519..2622918 (+)	2400	WP_102829002.1	penicillin-binding protein 1A	-
I6G33_RS12565 (I6G33_12565)	-	2622984..2624252 (-)	1269	WP_008568316.1	malic enzyme-like NAD(P)-binding protein	-
I6G33_RS12570 (I6G33_12570)	-	2624410..2625201 (-)	792	WP_102829003.1	thermonuclease family protein	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 37938.44 Da
• Isoelectric Point: 4.6269

>NTDB_id=513499 I6G33_RS12555 WP_102829001.1 2619276..2620340(-) (pilM) [Stutzerimonas degradans strain FDAARGOS_876]
MLGLFTKKANTLLGIDISSTSVKLLELSRSGNRYRVEAYAVEPLPPNAVVEKNIVELEGVGQALQRVVARAKINAKQAAV
AVSGSAVITKSIEMESGLSDDELENQLKIEADQYIPYPLEEVAIDFEVQGPAARTPGRVEVLLAACRKENVEIREAALAL
AGLTAKVVDVEAYALERSYGLLAPMLAGAQGELTVAVVDIGATMTTLSVLHNGRTIYTREQLFGGRQLTEEIQRRYGLSV
EEAGLAKKQGGLPDDYDSEVLQPFKEAVVQQVSRSLQFFFAAGQFHDVDYILLAGGTASLPGLDRLIQQKIGTQTLVANP
FADMSLSNKVNAGALASDAPALMIACGLAMRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=513499 I6G33_RS12555 WP_102829001.1 2619276..2620340(-) (pilM) [Stutzerimonas degradans strain FDAARGOS_876]
GTGCTAGGGCTCTTCACGAAGAAAGCGAACACGCTACTTGGGATCGATATTAGTTCGACATCCGTCAAGCTCCTCGAATT
GAGCCGCTCGGGTAATCGCTATCGGGTGGAGGCTTACGCCGTTGAGCCGCTACCGCCGAATGCCGTCGTCGAGAAGAATA
TCGTCGAGCTCGAAGGTGTCGGTCAGGCGCTGCAGCGTGTTGTCGCCAGGGCCAAGATCAATGCCAAGCAGGCGGCGGTT
GCCGTGTCTGGCTCGGCAGTCATCACCAAGAGCATCGAGATGGAGTCCGGCCTCTCGGACGATGAGTTGGAGAATCAGCT
CAAGATCGAGGCGGATCAGTACATCCCTTATCCCCTTGAAGAGGTCGCCATCGACTTCGAAGTACAGGGACCTGCTGCGC
GTACACCGGGACGTGTAGAGGTACTGCTGGCAGCCTGTCGTAAAGAAAACGTCGAAATTCGTGAGGCCGCCCTTGCGCTG
GCGGGCCTCACTGCCAAGGTCGTGGATGTCGAGGCCTATGCGCTGGAGCGCTCCTATGGCCTGCTTGCTCCGATGTTGGC
AGGTGCGCAGGGCGAGCTGACGGTAGCTGTCGTTGATATCGGTGCCACCATGACGACGCTAAGCGTGTTGCACAACGGAC
GCACTATCTATACGCGCGAACAGCTATTCGGCGGCCGCCAGCTGACCGAAGAGATTCAGCGGCGTTATGGTTTGTCCGTA
GAGGAAGCTGGTTTGGCCAAGAAACAGGGCGGTCTTCCAGATGACTATGACAGCGAGGTGTTGCAGCCGTTCAAAGAGGC
GGTGGTGCAACAGGTCTCGCGTTCGCTGCAGTTCTTCTTCGCCGCCGGGCAATTCCACGATGTGGATTACATTCTGCTGG
CCGGAGGTACGGCGTCGCTGCCGGGACTCGATCGTCTGATCCAGCAGAAGATCGGTACGCAGACTCTAGTCGCCAATCCC
TTTGCCGATATGTCGCTGAGTAACAAGGTCAACGCTGGTGCGCTGGCCAGTGATGCACCGGCGCTGATGATTGCGTGTGG
CTTGGCGATGAGGAGTTTCGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	55.65	100	0.557
comM	Acinetobacter nosocomialis M2	55.65	100	0.557
comM	Acinetobacter baylyi ADP1	53.672	100	0.537
pilM	Legionella pneumophila strain ERS1305867	47.458	100	0.475