Detailed information NTG0513459

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: I6G34_RS08185
• Genome accession: NZ_CP065720
• Coordinates: 1764492..1765556 (+)
• Length: 354 a.a.
• NCBI ID: WP_102839584.1
• Uniprot ID: A0AA47E2Z0
• Organism: Stutzerimonas frequens strain FDAARGOS_877
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1759492..1770556

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6G34_RS08170 (I6G34_08170)	-	1759618..1760412 (+)	795	WP_102839581.1	thermonuclease family protein	-
I6G34_RS08175 (I6G34_08175)	-	1760556..1761824 (+)	1269	WP_102839582.1	malic enzyme-like NAD(P)-binding protein	-
I6G34_RS08180 (I6G34_08180)	-	1761890..1764310 (-)	2421	WP_102839583.1	penicillin-binding protein 1A	-
I6G34_RS08185 (I6G34_08185)	comM	1764492..1765556 (+)	1065	WP_102839584.1	pilus assembly protein PilM	Machinery gene
I6G34_RS08190 (I6G34_08190)	-	1765556..1766128 (+)	573	WP_063539613.1	PilN domain-containing protein	-
I6G34_RS08195 (I6G34_08195)	pilO	1766125..1766748 (+)	624	WP_102839585.1	type 4a pilus biogenesis protein PilO	-
I6G34_RS08200 (I6G34_08200)	pilP	1766745..1767272 (+)	528	WP_102839586.1	type 4a pilus biogenesis lipoprotein PilP	-
I6G34_RS08205 (I6G34_08205)	pilQ	1767326..1769443 (+)	2118	WP_102839587.1	type IV pilus secretin PilQ	Machinery gene
I6G34_RS08210 (I6G34_08210)	aroK	1769449..1769994 (+)	546	WP_102839588.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 37738.15 Da
• Isoelectric Point: 4.6346

>NTDB_id=513459 I6G34_RS08185 WP_102839584.1 1764492..1765556(+) (comM) [Stutzerimonas frequens strain FDAARGOS_877]
MLGLFTKKANTLLGIDISSTSVKLLELSRSGNRYRVEAYAVEPLPPNAVVEKNIAELEGVGQALQRVVAKAKTGCKSAVV
AVSGSAVITKTIEMDAGLSDEELENQLKIEADQYIPYPLEEVAIDFEVQGPAPRAPGRVEVLLAACRKENVEVREAALAL
AGLAAKVVDVEAYALERSYDLLAPQLGSAHGELTVAVVDIGATMTTLSVLHNGRTIYSREQLFGGRQLTEEIQRRYGLSQ
EEAGLAKKQGGLPDDYDSEVLLPFKEAVVQQVSRSLQFFFAAGQFHDVDCILLAGGTASIPGLDHLIQQKIGTQTLVANP
FADMALSSKVNAGALASDAPSLMIACGLALRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=513459 I6G34_RS08185 WP_102839584.1 1764492..1765556(+) (comM) [Stutzerimonas frequens strain FDAARGOS_877]
GTGCTAGGGCTCTTCACTAAGAAAGCGAACACGCTGCTTGGGATCGATATCAGTTCGACCTCAGTCAAGCTTCTCGAATT
AAGTCGATCGGGGAACCGCTACCGGGTTGAGGCTTATGCGGTTGAGCCGCTCCCACCAAATGCCGTGGTCGAAAAGAACA
TCGCTGAACTGGAAGGCGTTGGCCAGGCTCTGCAGCGTGTGGTCGCAAAGGCTAAGACCGGCTGCAAGTCAGCCGTGGTA
GCCGTCTCCGGCTCAGCGGTGATCACCAAGACGATCGAGATGGACGCCGGGCTGTCCGACGAAGAGCTGGAAAACCAGCT
GAAGATCGAAGCCGACCAATATATTCCCTATCCGTTGGAAGAGGTGGCGATCGACTTTGAGGTCCAGGGGCCCGCGCCGC
GTGCGCCCGGTCGGGTCGAGGTTCTGCTCGCTGCCTGTCGCAAGGAAAACGTCGAGGTGCGCGAGGCGGCGCTGGCCCTG
GCCGGACTCGCCGCGAAGGTCGTTGATGTCGAGGCCTATGCGCTCGAGCGCTCCTATGACCTTCTGGCGCCGCAGTTAGG
GAGCGCGCATGGTGAACTGACCGTCGCCGTCGTGGATATCGGCGCAACGATGACGACTCTGAGCGTCCTGCATAACGGAC
GCACCATATACAGTCGTGAGCAATTGTTCGGGGGGCGGCAGCTGACGGAGGAAATCCAACGCCGTTATGGGCTTTCACAA
GAGGAGGCTGGCCTCGCTAAAAAGCAGGGAGGGCTTCCTGATGACTACGACAGTGAAGTTTTGCTTCCGTTCAAAGAAGC
GGTCGTTCAGCAGGTCTCACGCTCGCTGCAGTTCTTCTTCGCTGCTGGGCAGTTTCATGATGTCGATTGCATTCTGCTTG
CTGGTGGAACGGCTTCCATCCCGGGTCTTGATCATCTCATTCAGCAGAAGATCGGCACCCAGACTCTAGTTGCCAACCCG
TTTGCCGATATGGCTTTGAGTAGCAAGGTCAACGCAGGCGCGCTGGCCAGTGATGCGCCCTCGCTGATGATTGCGTGTGG
GTTGGCGCTAAGGAGTTTCGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter nosocomialis M2	56.497	100	0.565
pilM	Acinetobacter baumannii D1279779	56.497	100	0.565
comM	Acinetobacter baylyi ADP1	53.39	100	0.534
pilM	Legionella pneumophila strain ERS1305867	46.893	100	0.469