Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   I6G42_RS01965 Genome accession   NZ_CP065707
Coordinates   404882..405640 (+) Length   252 a.a.
NCBI ID   WP_038804784.1    Uniprot ID   A0A7T2ZXC0
Organism   Streptococcus oralis strain FDAARGOS_885     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 399882..410640
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6G42_RS01935 (I6G42_01935) comE 400472..401224 (-) 753 WP_000866081.1 competence system response regulator transcription factor ComE Regulator
  I6G42_RS01940 (I6G42_01940) comD 401221..402540 (-) 1320 WP_038804779.1 competence system sensor histidine kinase ComD Regulator
  I6G42_RS01945 (I6G42_01945) comC 402562..402687 (-) 126 WP_000799680.1 competence-stimulating peptide ComC Regulator
  I6G42_RS01955 (I6G42_01955) rlmH 402971..403450 (-) 480 WP_038804781.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  I6G42_RS01960 (I6G42_01960) htrA 403634..404824 (+) 1191 WP_038804782.1 S1C family serine protease Regulator
  I6G42_RS01965 (I6G42_01965) spo0J 404882..405640 (+) 759 WP_038804784.1 ParB/RepB/Spo0J family partition protein Regulator
  I6G42_RS01970 (I6G42_01970) dnaA 405864..407225 (+) 1362 WP_038804785.1 chromosomal replication initiator protein DnaA -
  I6G42_RS01975 (I6G42_01975) dnaN 407384..408520 (+) 1137 WP_000581146.1 DNA polymerase III subunit beta -
  I6G42_RS01980 (I6G42_01980) - 408585..408779 (+) 195 WP_038804786.1 DUF951 domain-containing protein -
  I6G42_RS01985 (I6G42_01985) ychF 408864..409979 (+) 1116 WP_001218700.1 redox-regulated ATPase YchF -
  I6G42_RS01990 (I6G42_01990) pth 410053..410622 (+) 570 WP_038804787.1 aminoacyl-tRNA hydrolase -

Sequence

Protein


Download         Length: 252 a.a.        Molecular weight: 29099.61 Da        Isoelectric Point: 9.2997

>NTDB_id=513273 I6G42_RS01965 WP_038804784.1 404882..405640(+) (spo0J) [Streptococcus oralis strain FDAARGOS_885]
MEKFEMISISDIQKNPYQPRKEFDVKKLKELAQSIKENGVIQPIIVRQSPVIGYEILAGERRYRASLLAGLTSIPAVVKH
LSDQEMMIQSIIENLQRENLNPVEEARAYESLVEKGFTHTEIADKMGKSRPYITNFIRLLSLPDYILSEVENGKISQAHA
RSLVGLDKEQQEYFFQLIKNEDISVRKLETLLTEKKQKKQKKSDSFIKDEEDKLKKLLGLNVEIKLSKKDTGKVIISFSN
QEEYDRIINSLK

Nucleotide


Download         Length: 759 bp        

>NTDB_id=513273 I6G42_RS01965 WP_038804784.1 404882..405640(+) (spo0J) [Streptococcus oralis strain FDAARGOS_885]
ATGGAAAAATTTGAAATGATTTCTATCTCGGACATACAAAAAAATCCTTACCAACCTCGGAAAGAATTTGATGTAAAAAA
ATTAAAAGAATTAGCTCAGTCAATCAAAGAAAATGGGGTCATCCAACCCATCATCGTTCGTCAATCTCCTGTAATTGGTT
ATGAAATCCTCGCAGGAGAGAGACGATATCGGGCTTCTCTCTTGGCTGGTCTGACTTCTATTCCAGCCGTTGTGAAACAC
CTCTCAGATCAGGAAATGATGATTCAGTCTATCATTGAGAATTTACAGAGAGAAAACTTGAATCCAGTTGAAGAAGCACG
CGCCTACGAATCTTTAGTAGAGAAAGGATTTACTCACACTGAGATAGCGGATAAAATGGGGAAATCTCGACCTTATATCA
CTAATTTTATTCGTTTACTTTCCCTACCAGATTATATCTTATCTGAAGTAGAAAATGGAAAAATTTCTCAAGCTCATGCA
CGTTCACTAGTTGGTTTGGATAAAGAGCAACAAGAATATTTCTTCCAATTGATCAAAAACGAAGATATCTCTGTGAGAAA
GTTAGAAACACTGCTGACAGAGAAAAAACAAAAGAAGCAGAAAAAAAGTGATTCTTTCATCAAAGATGAGGAAGATAAAT
TAAAAAAACTACTTGGATTAAATGTAGAAATTAAACTTTCTAAAAAAGATACTGGAAAGGTTATTATTTCTTTTTCAAAC
CAAGAAGAATATGACAGAATTATCAACAGCCTGAAATAA

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(6-94)

HTH domain found in ParB protein (HTH_ParB)

(146-192)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7T2ZXC0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

50.198

100

0.504