Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   I6G43_RS04625 Genome accession   NZ_CP065706
Coordinates   970199..971155 (+) Length   318 a.a.
NCBI ID   WP_038806177.1    Uniprot ID   -
Organism   Streptococcus oralis strain FDAARGOS_886     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 965199..976155
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6G43_RS04610 (I6G43_04610) smpB 967467..967934 (+) 468 WP_038806180.1 SsrA-binding protein SmpB -
  I6G43_RS04615 (I6G43_04615) tehB 967949..968809 (+) 861 WP_038806179.1 SAM-dependent methyltransferase TehB -
  I6G43_RS04620 (I6G43_04620) - 968974..970122 (+) 1149 WP_038806178.1 DUF1887 family protein -
  I6G43_RS04625 (I6G43_04625) coiA 970199..971155 (+) 957 WP_038806177.1 competence protein CoiA Machinery gene
  I6G43_RS04630 (I6G43_04630) pepF 971174..972976 (+) 1803 WP_038806176.1 oligoendopeptidase F Regulator
  I6G43_RS04635 (I6G43_04635) - 972978..973691 (+) 714 WP_068981984.1 O-methyltransferase -
  I6G43_RS04640 (I6G43_04640) prsA 973757..974698 (+) 942 WP_038806175.1 peptidylprolyl isomerase PrsA -
  I6G43_RS04645 (I6G43_04645) ftsW 974888..976111 (+) 1224 WP_038806174.1 cell division peptidoglycan polymerase FtsW -

Sequence

Protein


Download         Length: 318 a.a.        Molecular weight: 37824.21 Da        Isoelectric Point: 9.3797

>NTDB_id=513221 I6G43_RS04625 WP_038806177.1 970199..971155(+) (coiA) [Streptococcus oralis strain FDAARGOS_886]
MFVARDAQGKLVNALEKDVSKQAYTCPACGGGLRLRQGQSIRTHFAHERLRDCIAIFENESPEHLGNKEAFYHWAKKDNQ
AALEYSLPEIQQVADVLVNDKLALEVQCSPLSQKLLGDRSQGYRSQGYQVIWLLGEKLWLKERLTQLQRGFLYFSQNMGF
YVWELDFKKQILRLKYLLHQDLRGKLHFQVKEFPYGQGNLLEILRFPYQKRKLLSFTVAQDSTICHYIRQQLYYQTPYWM
KKQEEAYHQGDNLLNRQLDDWYPQVKPIESGDFLQIETDLTSYYRNFQTYYQKNPKNNRQKLYPPAFYHLYFSKNVVK

Nucleotide


Download         Length: 957 bp        

>NTDB_id=513221 I6G43_RS04625 WP_038806177.1 970199..971155(+) (coiA) [Streptococcus oralis strain FDAARGOS_886]
ATGTTTGTAGCCAGAGATGCACAGGGGAAATTGGTGAATGCCCTCGAAAAAGATGTTAGCAAGCAAGCTTATACTTGTCC
AGCCTGTGGTGGTGGACTACGATTACGTCAGGGACAGAGTATTCGAACGCACTTTGCCCATGAAAGGTTAAGAGATTGTA
TTGCCATTTTTGAAAATGAAAGTCCAGAACACTTGGGCAACAAAGAGGCCTTCTATCACTGGGCCAAGAAGGACAATCAG
GCCGCCTTAGAATATAGTCTGCCCGAGATTCAGCAGGTTGCGGATGTTCTCGTCAATGATAAACTAGCTCTGGAGGTTCA
GTGCAGTCCCTTGTCTCAAAAGCTTTTAGGCGATAGAAGCCAAGGATACCGTAGCCAGGGCTATCAGGTTATCTGGCTAC
TGGGAGAAAAACTCTGGTTAAAAGAGCGATTAACACAACTGCAAAGGGGATTTCTCTATTTTAGTCAAAATATGGGATTC
TATGTTTGGGAACTAGATTTCAAAAAACAAATTTTGAGACTTAAATACCTTTTACATCAGGATCTACGTGGCAAGCTTCA
TTTTCAGGTCAAGGAATTTCCTTATGGTCAAGGAAATCTCTTGGAAATTCTACGATTCCCCTATCAAAAACGAAAACTGC
TTAGTTTTACGGTTGCCCAAGATTCAACTATCTGTCACTACATTCGCCAACAACTATACTACCAAACGCCTTACTGGATG
AAGAAGCAGGAGGAAGCTTATCATCAAGGAGACAATTTATTAAACCGTCAACTAGATGACTGGTATCCCCAAGTCAAGCC
GATAGAGTCAGGAGATTTTTTGCAGATTGAAACGGATTTGACTAGCTATTATAGAAATTTTCAGACCTACTATCAAAAAA
ATCCGAAAAATAATCGCCAAAAGCTCTATCCACCAGCCTTTTATCACTTATATTTCTCAAAAAATGTGGTAAAATAG

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(1-247)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Streptococcus pneumoniae Rx1

70.126

100

0.701
  coiA Streptococcus pneumoniae D39

70.126

100

0.701
  coiA Streptococcus pneumoniae R6

70.126

100

0.701
  coiA Streptococcus mitis NCTC 12261

70.126

100

0.701
  coiA Streptococcus pneumoniae TIGR4

69.811

100

0.698
  coiA Lactococcus lactis subsp. cremoris KW2

41.358

100

0.421