Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   I6G43_RS00835 Genome accession   NZ_CP065706
Coordinates   179130..179888 (+) Length   252 a.a.
NCBI ID   WP_000410355.1    Uniprot ID   A0A7T3DU33
Organism   Streptococcus oralis strain FDAARGOS_886     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 174130..184888
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6G43_RS00805 (I6G43_00805) comE 174719..175471 (-) 753 WP_000866081.1 competence system response regulator transcription factor ComE Regulator
  I6G43_RS00810 (I6G43_00810) comD 175468..176787 (-) 1320 WP_001048119.1 competence system sensor histidine kinase ComD Regulator
  I6G43_RS00815 (I6G43_00815) comC 176809..176934 (-) 126 WP_000799680.1 competence-stimulating peptide ComC Regulator
  I6G43_RS00825 (I6G43_00825) rlmH 177218..177697 (-) 480 WP_000694218.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  I6G43_RS00830 (I6G43_00830) htrA 177882..179072 (+) 1191 WP_000681799.1 S1C family serine protease Regulator
  I6G43_RS00835 (I6G43_00835) spo0J 179130..179888 (+) 759 WP_000410355.1 ParB/RepB/Spo0J family partition protein Regulator
  I6G43_RS00840 (I6G43_00840) dnaA 180112..181473 (+) 1362 WP_000660603.1 chromosomal replication initiator protein DnaA -
  I6G43_RS00845 (I6G43_00845) dnaN 181632..182768 (+) 1137 WP_000581140.1 DNA polymerase III subunit beta -
  I6G43_RS00850 (I6G43_00850) - 182833..183027 (+) 195 WP_000285184.1 DUF951 domain-containing protein -
  I6G43_RS00855 (I6G43_00855) ychF 183112..184227 (+) 1116 WP_001218697.1 redox-regulated ATPase YchF -
  I6G43_RS00860 (I6G43_00860) pth 184299..184868 (+) 570 WP_000163925.1 aminoacyl-tRNA hydrolase -

Sequence

Protein


Download         Length: 252 a.a.        Molecular weight: 29072.63 Da        Isoelectric Point: 9.3331

>NTDB_id=513185 I6G43_RS00835 WP_000410355.1 179130..179888(+) (spo0J) [Streptococcus oralis strain FDAARGOS_886]
MEKFEMISISDIQKNPYQPRKEFDVKKLKELAQSIKENGLIQPIIVRQSPVIGYEILAGERRYRASLLAGLTSIPAVVKH
LSDQEMMIQSIIENLQRENLNPIEEARAYESLVEKGFTHTEIADKMGKSRPYITNFIRLLSLPEHILAEVENGKISQAHA
RSLVGLDKEQQEYFFQLIKNEDISVRKLETLLTEKKQKKQKKSDSFIKDEEDKLKKLLGLNVEIKLSKKDTGKVIISFSS
QEEYDRIINSLK

Nucleotide


Download         Length: 759 bp        

>NTDB_id=513185 I6G43_RS00835 WP_000410355.1 179130..179888(+) (spo0J) [Streptococcus oralis strain FDAARGOS_886]
ATGGAAAAATTTGAAATGATTTCTATCTCGGACATACAAAAAAATCCTTACCAACCTCGGAAAGAATTTGATGTAAAAAA
ATTAAAAGAATTAGCTCAGTCAATCAAAGAAAATGGGCTAATCCAACCAATCATCGTTCGTCAATCTCCTGTAATTGGTT
ATGAAATCCTTGCAGGAGAAAGACGATATCGAGCTTCTCTCTTGGCTGGTCTGACCTCTATTCCAGCAGTTGTAAAACAC
CTCTCAGATCAGGAAATGATGATTCAGTCTATCATTGAGAATTTACAGAGAGAAAACTTGAATCCAATTGAAGAAGCACG
CGCCTACGAATCTTTAGTAGAGAAAGGATTTACTCACACTGAGATAGCGGATAAAATGGGAAAATCTCGTCCTTATATCA
CTAATTTTATTCGTTTGCTTTCCCTACCAGAGCATATCTTAGCTGAAGTAGAAAATGGAAAAATTTCTCAAGCTCATGCA
CGTTCACTAGTTGGTTTGGATAAAGAGCAACAAGAATATTTCTTCCAATTGATCAAAAACGAAGATATCTCTGTGAGAAA
GTTAGAAACACTGCTGACAGAGAAAAAACAAAAGAAGCAGAAAAAAAGTGATTCTTTCATCAAAGATGAGGAAGATAAAT
TAAAAAAACTACTTGGATTGAATGTAGAAATTAAACTTTCTAAAAAAGATACTGGAAAGGTTATTATTTCTTTTTCAAGC
CAAGAAGAATATGACAGAATTATCAACAGCCTGAAATAA

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(145-192)

ParB/Sulfiredoxin domain (ParB_N)

(6-94)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7T3DU33

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

51.779

100

0.52