Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | I6G49_RS02905 | Genome accession | NZ_CP065693 |
| Coordinates | 549983..550513 (-) | Length | 176 a.a. |
| NCBI ID | WP_029740211.1 | Uniprot ID | A0A263VT06 |
| Organism | Enterobacter asburiae strain FDAARGOS_892 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Genomic island | 531081..561220 | 549983..550513 | within | 0 |
Gene organization within MGE regions
Location: 531081..561220
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6G49_RS02815 (I6G49_02815) | - | 531081..532445 (-) | 1365 | WP_059347288.1 | anti-phage deoxyguanosine triphosphatase | - |
| I6G49_RS02820 (I6G49_02820) | - | 532973..533539 (+) | 567 | WP_081051437.1 | DNA adenine methylase | - |
| I6G49_RS02825 (I6G49_02825) | - | 533536..534381 (+) | 846 | WP_048216955.1 | 8-oxoguanine DNA glycosylase | - |
| I6G49_RS02830 (I6G49_02830) | - | 534325..534999 (-) | 675 | WP_223862018.1 | dehydrogenase | - |
| I6G49_RS02835 (I6G49_02835) | - | 534977..535582 (-) | 606 | WP_048216956.1 | 7-cyano-7-deazaguanine synthase | - |
| I6G49_RS02840 (I6G49_02840) | - | 535579..536820 (-) | 1242 | WP_081051438.1 | PfkB family carbohydrate kinase | - |
| I6G49_RS02845 (I6G49_02845) | - | 536817..537149 (-) | 333 | WP_048216957.1 | hypothetical protein | - |
| I6G49_RS02850 (I6G49_02850) | - | 537509..538114 (+) | 606 | WP_048216958.1 | hypothetical protein | - |
| I6G49_RS02855 (I6G49_02855) | - | 538399..538641 (-) | 243 | WP_048216959.1 | hypothetical protein | - |
| I6G49_RS02860 (I6G49_02860) | - | 538901..539366 (+) | 466 | Protein_493 | tyrosine-type recombinase/integrase | - |
| I6G49_RS02865 (I6G49_02865) | - | 539370..541496 (+) | 2127 | WP_059347289.1 | ATP-dependent nuclease | - |
| I6G49_RS02870 (I6G49_02870) | - | 541499..543190 (+) | 1692 | WP_059347290.1 | UvrD-helicase domain-containing protein | - |
| I6G49_RS02875 (I6G49_02875) | - | 543391..543810 (-) | 420 | WP_048216962.1 | hypothetical protein | - |
| I6G49_RS02880 (I6G49_02880) | - | 543803..544750 (-) | 948 | WP_232248556.1 | hypothetical protein | - |
| I6G49_RS02885 (I6G49_02885) | - | 545064..546044 (-) | 981 | WP_000019402.1 | IS5-like element IS5 family transposase | - |
| I6G49_RS02890 (I6G49_02890) | - | 546085..547035 (-) | 951 | WP_232248565.1 | hypothetical protein | - |
| I6G49_RS02895 (I6G49_02895) | - | 547028..548590 (-) | 1563 | WP_048216964.1 | site-specific integrase | - |
| I6G49_RS02900 (I6G49_02900) | - | 548577..549824 (-) | 1248 | WP_048216965.1 | tyrosine-type recombinase/integrase | - |
| I6G49_RS02905 (I6G49_02905) | ssb | 549983..550513 (-) | 531 | WP_029740211.1 | single-stranded DNA-binding protein SSB1 | Machinery gene |
| I6G49_RS02910 (I6G49_02910) | uvrA | 550764..553586 (+) | 2823 | WP_054830309.1 | excinuclease ABC subunit UvrA | - |
| I6G49_RS02915 (I6G49_02915) | - | 553590..553943 (-) | 354 | WP_023310053.1 | MmcQ/YjbR family DNA-binding protein | - |
| I6G49_RS02920 (I6G49_02920) | - | 553946..554362 (-) | 417 | WP_054830310.1 | secondary thiamine-phosphate synthase enzyme YjbQ | - |
| I6G49_RS02925 (I6G49_02925) | aphA | 554476..555189 (-) | 714 | WP_059347291.1 | acid phosphatase AphA | - |
| I6G49_RS02930 (I6G49_02930) | tyrB | 555407..556600 (-) | 1194 | WP_059347292.1 | aromatic amino acid transaminase | - |
| I6G49_RS02935 (I6G49_02935) | - | 556807..557364 (+) | 558 | WP_029740216.1 | DUF2589 domain-containing protein | - |
| I6G49_RS02940 (I6G49_02940) | - | 557440..558042 (+) | 603 | WP_059347293.1 | DUF2589 domain-containing protein | - |
| I6G49_RS02945 (I6G49_02945) | - | 558042..558491 (+) | 450 | WP_045888341.1 | lysozyme | - |
| I6G49_RS02950 (I6G49_02950) | - | 558510..558992 (+) | 483 | WP_059347294.1 | ribonuclease domain-containing protein | - |
| I6G49_RS02955 (I6G49_02955) | - | 559058..559342 (+) | 285 | WP_197937163.1 | hypothetical protein | - |
| I6G49_RS02960 (I6G49_02960) | - | 559371..560068 (+) | 698 | WP_103215986.1 | IS1-like element IS1A family transposase | - |
| I6G49_RS02965 (I6G49_02965) | - | 560243..560533 (+) | 291 | WP_029740221.1 | hypothetical protein | - |
| I6G49_RS02970 (I6G49_02970) | - | 560615..561208 (-) | 594 | WP_223862650.1 | response regulator transcription factor | - |
Sequence
Protein
Download Length: 176 a.a. Molecular weight: 18792.81 Da Isoelectric Point: 5.2456
>NTDB_id=513039 I6G49_RS02905 WP_029740211.1 549983..550513(-) (ssb) [Enterobacter asburiae strain FDAARGOS_892]
MASRGVNKVILVGNLGQDPEVRYMPSGGAVANITLATSESWRDKATGEMKEQTEWHRVVLFGKLAEVAGEYLRKGSQVYI
EGQLRTRKWTDQAGAEKYTTEVVVNVGGTMQMLGGRQGGGAPAGGGQSQQQGGWGQPQQPQGGNQFSGGAQSRPQQQSAP
APSNEPPMDFDDDIPF
MASRGVNKVILVGNLGQDPEVRYMPSGGAVANITLATSESWRDKATGEMKEQTEWHRVVLFGKLAEVAGEYLRKGSQVYI
EGQLRTRKWTDQAGAEKYTTEVVVNVGGTMQMLGGRQGGGAPAGGGQSQQQGGWGQPQQPQGGNQFSGGAQSRPQQQSAP
APSNEPPMDFDDDIPF
Nucleotide
Download Length: 531 bp
>NTDB_id=513039 I6G49_RS02905 WP_029740211.1 549983..550513(-) (ssb) [Enterobacter asburiae strain FDAARGOS_892]
ATGGCCAGCAGAGGCGTAAACAAGGTGATTCTCGTCGGTAATCTGGGCCAGGACCCGGAAGTACGCTACATGCCGAGTGG
TGGCGCAGTTGCCAACATTACGCTGGCTACTTCCGAATCCTGGCGTGATAAAGCGACCGGTGAGATGAAAGAGCAGACCG
AATGGCACCGTGTTGTGCTGTTTGGCAAACTGGCTGAAGTGGCCGGTGAGTATCTGCGTAAAGGTTCTCAGGTCTATATC
GAAGGCCAGCTGCGTACCCGCAAATGGACCGATCAGGCCGGCGCTGAGAAGTACACCACAGAAGTCGTGGTCAACGTGGG
CGGCACCATGCAGATGCTGGGTGGCCGTCAGGGCGGTGGTGCACCGGCAGGTGGCGGCCAGAGCCAGCAGCAGGGCGGTT
GGGGTCAGCCTCAGCAGCCGCAGGGCGGCAACCAGTTCAGCGGCGGCGCACAGTCTCGTCCGCAGCAGCAGTCTGCTCCG
GCGCCGTCTAACGAACCGCCAATGGATTTCGACGACGACATTCCGTTCTAG
ATGGCCAGCAGAGGCGTAAACAAGGTGATTCTCGTCGGTAATCTGGGCCAGGACCCGGAAGTACGCTACATGCCGAGTGG
TGGCGCAGTTGCCAACATTACGCTGGCTACTTCCGAATCCTGGCGTGATAAAGCGACCGGTGAGATGAAAGAGCAGACCG
AATGGCACCGTGTTGTGCTGTTTGGCAAACTGGCTGAAGTGGCCGGTGAGTATCTGCGTAAAGGTTCTCAGGTCTATATC
GAAGGCCAGCTGCGTACCCGCAAATGGACCGATCAGGCCGGCGCTGAGAAGTACACCACAGAAGTCGTGGTCAACGTGGG
CGGCACCATGCAGATGCTGGGTGGCCGTCAGGGCGGTGGTGCACCGGCAGGTGGCGGCCAGAGCCAGCAGCAGGGCGGTT
GGGGTCAGCCTCAGCAGCCGCAGGGCGGCAACCAGTTCAGCGGCGGCGCACAGTCTCGTCCGCAGCAGCAGTCTGCTCCG
GCGCCGTCTAACGAACCGCCAATGGATTTCGACGACGACATTCCGTTCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
75.556 |
100 |
0.773 |
| ssb | Glaesserella parasuis strain SC1401 |
56.216 |
100 |
0.591 |
| ssb | Neisseria meningitidis MC58 |
46.629 |
100 |
0.472 |
| ssb | Neisseria gonorrhoeae MS11 |
46.629 |
100 |
0.472 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
35.556 |
100 |
0.364 |