Detailed information NTG0512396

Bioinformatically predicted

Overview

• Name: comYH
• Type: Machinery gene
• Locus tag: I6G86_RS03360
• Genome accession: NZ_CP065637
• Coordinates: 610492..611427 (+)
• Length: 311 a.a.
• NCBI ID: WP_014025404.1
• Uniprot ID: A0A6L2ZWA9
• Organism: Lactococcus garvieae strain FDAARGOS_929
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 605492..616427

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6G86_RS03330 (I6G86_03330)	-	605925..606371 (+)	447	WP_003133306.1	DNA starvation/stationary phase protection protein	-
I6G86_RS03335 (I6G86_03335)	-	606409..606789 (-)	381	WP_017368654.1	rhodanese-like domain-containing protein	-
I6G86_RS03340 (I6G86_03340)	-	606809..607774 (-)	966	WP_003133309.1	ROK family glucokinase	-
I6G86_RS03345 (I6G86_03345)	-	607767..607979 (-)	213	WP_003133311.1	YqgQ family protein	-
I6G86_RS03350 (I6G86_03350)	typA	608300..610141 (+)	1842	WP_003133313.1	translational GTPase TypA	-
I6G86_RS03355 (I6G86_03355)	-	610216..610446 (+)	231	WP_003133314.1	DUF3165 family protein	-
I6G86_RS03360 (I6G86_03360)	comYH	610492..611427 (+)	936	WP_014025404.1	class I SAM-dependent methyltransferase	Machinery gene
I6G86_RS03365 (I6G86_03365)	-	611512..612705 (+)	1194	WP_042218440.1	acetate kinase	-
I6G86_RS03370 (I6G86_03370)	-	612824..614017 (+)	1194	WP_042218438.1	acetate kinase	-
I6G86_RS03375 (I6G86_03375)	pyrH	614108..614824 (+)	717	WP_042218435.1	UMP kinase	-
I6G86_RS03380 (I6G86_03380)	frr	614854..615411 (+)	558	WP_003133324.1	ribosome recycling factor	-
I6G86_RS03385 (I6G86_03385)	-	615519..616379 (+)	861	WP_042218433.1	S1 RNA-binding domain-containing protein	-

Sequence

Protein

• Length: 311 a.a.
• Molecular weight: 35138.19 Da
• Isoelectric Point: 4.6737

>NTDB_id=512396 I6G86_RS03360 WP_014025404.1 610492..611427(+) (comYH) [Lactococcus garvieae strain FDAARGOS_929]
MDIEKIEKAFGLVLENIMAIQAELLTDFYDAFVEQNAAYLGALEFASLTKENNDKVRSMNLTKSEWQKLFQFVLLQGSRV
APMQANHNLTPDSIGFIFNFIIEELHKERKIRVLEFGSGTGNLAETLLVHMQKEVDYVGFEVDDLLLDLSASMSEVMGTE
ASFLQIDAVKPQPLESVDVVMSDLPVGYYPDDETARHFQVHDKSEHTYVHHLMIEQSFKYLKESGFALFLAPDNLLTSAQ
SEFLKAWIKEHAHVAAVITLPSSLFKGAGKSIYLLSKNQTNTPTFVYPLADLADRSILQEFMSEFVKNVKI

Nucleotide

• Length: 936 bp

>NTDB_id=512396 I6G86_RS03360 WP_014025404.1 610492..611427(+) (comYH) [Lactococcus garvieae strain FDAARGOS_929]
ATGGATATAGAGAAAATCGAAAAAGCCTTTGGATTGGTTCTTGAAAATATTATGGCAATTCAAGCGGAGCTTTTGACGGA
TTTTTATGATGCTTTTGTGGAACAAAATGCAGCTTACTTAGGCGCTTTAGAGTTTGCATCTCTGACGAAGGAAAATAATG
ATAAGGTTCGTTCAATGAACCTCACGAAAAGTGAGTGGCAAAAGCTGTTTCAGTTTGTCTTGCTTCAAGGGTCACGTGTC
GCACCAATGCAAGCAAATCATAATTTAACACCAGATTCTATTGGGTTTATCTTTAATTTTATCATTGAAGAGTTGCACAA
AGAAAGAAAGATTCGTGTACTAGAATTTGGCTCAGGAACAGGGAATTTAGCGGAAACGCTCTTGGTTCATATGCAAAAAG
AAGTAGACTATGTTGGTTTTGAAGTAGATGACCTCTTGTTGGATTTATCCGCTTCAATGTCAGAAGTCATGGGAACAGAA
GCAAGTTTTCTCCAAATTGACGCCGTGAAACCACAGCCCTTGGAGTCTGTAGATGTTGTGATGAGTGATCTCCCGGTTGG
TTATTATCCAGACGATGAAACTGCTCGCCATTTTCAAGTGCATGACAAATCAGAACATACCTATGTGCACCACTTAATGA
TTGAGCAATCCTTTAAGTATCTGAAGGAGAGTGGTTTTGCGCTCTTCTTAGCTCCAGATAATCTTTTGACAAGTGCACAG
TCAGAATTTTTGAAGGCTTGGATTAAAGAACATGCACATGTTGCTGCAGTCATTACATTGCCTTCATCACTCTTTAAAGG
TGCAGGAAAATCGATTTATTTATTAAGTAAAAACCAAACAAATACACCAACTTTTGTTTACCCCTTGGCTGATTTAGCAG
ACCGTTCTATTTTGCAAGAATTTATGTCTGAGTTTGTGAAAAATGTCAAGATTTGA

Domains

Predicted by InterproScan.

• N-6 DNA Methylase (N6_Mtase) (132-286)

3D structure

• AlphaFold DB: A0A6L2ZWA9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comYH	Streptococcus mutans UA140	49.677	99.678	0.495
comYH	Streptococcus mutans UA159	49.355	99.678	0.492