Detailed information NTG0512186

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: I6H05_RS06690
• Genome accession: NZ_CP065604
• Coordinates: 1405462..1406166 (+)
• Length: 234 a.a.
• NCBI ID: WP_025298122.1
• Uniprot ID: -
• Organism: Aggregatibacter actinomycetemcomitans strain FDAARGOS_948
• Function: require for natural transformation (predicted from homology) Unclear

Genomic Context

Location: 1400462..1411166

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6H05_RS06670 (I6H05_06670)	-	1400783..1401901 (-)	1119	WP_005548211.1	TniQ family protein	-
I6H05_RS06675 (I6H05_06675)	-	1401859..1402752 (-)	894	WP_005541478.1	TniB family NTP-binding protein	-
I6H05_RS06680 (I6H05_06680)	-	1402752..1404671 (-)	1920	WP_025298121.1	Mu transposase C-terminal domain-containing protein	-
I6H05_RS06685 (I6H05_06685)	-	1404664..1405326 (-)	663	WP_005559213.1	heteromeric transposase endonuclease subunit TnsA	-
I6H05_RS06690 (I6H05_06690)	comM	1405462..1406166 (+)	705	WP_025298122.1	ATP-binding protein	Machinery gene
I6H05_RS06695 (I6H05_06695)	-	1406178..1406996 (-)	819	WP_005548203.1	divergent polysaccharide deacetylase family protein	-
I6H05_RS06700 (I6H05_06700)	envC	1407002..1408261 (-)	1260	WP_025298123.1	murein hydrolase activator EnvC	-
I6H05_RS06705 (I6H05_06705)	-	1408470..1410128 (-)	1659	WP_005571009.1	phospho-sugar mutase	-
I6H05_RS06710 (I6H05_06710)	-	1410434..1411117 (+)	684	WP_005567036.1	2,3-diphosphoglycerate-dependent phosphoglycerate mutase	-

Sequence

Protein

• Length: 234 a.a.
• Molecular weight: 26208.09 Da
• Isoelectric Point: 9.8867

>NTDB_id=512186 I6H05_RS06690 WP_025298122.1 1405462..1406166(+) (comM) [Aggregatibacter actinomycetemcomitans strain FDAARGOS_948]
MPLICNFDSGTIPKPGEISLAHNGILFLDELPEFERKVLDALRQPLESGEIIISRANAKIQFPAKFQLIAAMNPSPTGHY
QGTHNRTSPQQVMRYLNRLSGPFLDRFDLSIEVPLLPQGSLQNSGDRGESSATVREKVLKTRAIQLQRAGKINAHLNSKE
IERDCKLTDKDAQFLENALTKLGLSVRAYHRILKVPRTIADLDGEQHINQRHLAEALGYRAMDRLLQKLAKNSA

Nucleotide

• Length: 705 bp

>NTDB_id=512186 I6H05_RS06690 WP_025298122.1 1405462..1406166(+) (comM) [Aggregatibacter actinomycetemcomitans strain FDAARGOS_948]
ATGCCACTTATTTGTAACTTTGACAGCGGCACGATCCCCAAACCGGGCGAAATTTCCCTCGCTCACAATGGCATTCTTTT
CTTAGATGAGTTGCCCGAATTTGAACGCAAAGTGCTGGACGCGCTGCGTCAACCATTGGAAAGTGGCGAAATTATTATTT
CCCGCGCCAACGCCAAGATTCAATTTCCGGCAAAATTTCAACTGATTGCCGCGATGAATCCCAGCCCGACAGGGCATTAT
CAAGGCACGCATAATCGCACCTCACCACAACAAGTTATGCGTTATCTGAATCGGTTATCCGGCCCTTTTTTAGATCGCTT
CGATTTATCCATTGAAGTGCCCTTATTACCACAAGGCAGCTTACAAAATAGCGGCGATCGTGGCGAATCCAGCGCAACGG
TGCGAGAAAAAGTCCTGAAAACCCGTGCCATTCAACTTCAGCGCGCCGGCAAAATTAATGCCCATTTAAATAGCAAAGAA
ATCGAACGGGACTGCAAACTAACCGACAAAGACGCACAGTTCCTGGAAAATGCCCTGACTAAACTGGGGCTTTCCGTACG
AGCGTACCACCGCATACTGAAAGTGCCCCGCACCATTGCCGATTTAGATGGAGAACAACACATCAACCAGCGCCATCTGG
CCGAAGCTCTGGGTTATCGGGCAATGGACAGGTTGTTGCAAAAATTGGCGAAAAACTCGGCGTAA

Domains

Predicted by InterproScan.

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (128-220)

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (9-118)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Haemophilus influenzae Rd KW20	86.087	98.291	0.846
comM	Glaesserella parasuis strain SC1401	80.172	99.145	0.795
comM	Vibrio cholerae strain A1552	67.873	94.444	0.641
comM	Vibrio campbellii strain DS40M4	65.909	94.017	0.62
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	51.111	96.154	0.491
comM	Legionella pneumophila str. Paris	50.935	91.453	0.466
comM	Legionella pneumophila strain ERS1305867	50.935	91.453	0.466