Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   STCNRZ1202_RS09350 Genome accession   NZ_CP065506
Coordinates   1788638..1789873 (+) Length   411 a.a.
NCBI ID   WP_347229638.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain CNRZ1202     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1783638..1794873
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STCNRZ1202_RS09320 (STCNRZ1202_09325) - 1784105..1786711 (+) 2607 WP_347229637.1 YfhO family protein -
  STCNRZ1202_RS09340 (STCNRZ1202_09345) - 1787255..1787938 (-) 684 WP_096811735.1 YoaK family protein -
  STCNRZ1202_RS09345 (STCNRZ1202_09350) rlmH 1787954..1788433 (-) 480 WP_002952297.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  STCNRZ1202_RS09350 (STCNRZ1202_09355) htrA 1788638..1789873 (+) 1236 WP_347229638.1 trypsin-like peptidase domain-containing protein Regulator
  STCNRZ1202_RS09355 (STCNRZ1202_09360) spo0J 1789939..1790706 (+) 768 WP_002952299.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 411 a.a.        Molecular weight: 42917.22 Da        Isoelectric Point: 4.7061

>NTDB_id=511408 STCNRZ1202_RS09350 WP_347229638.1 1788638..1789873(+) (htrA) [Streptococcus thermophilus strain CNRZ1202]
MKKFNWKKIVAPIVMLIIGLLGGLLGAFILLTAAGVSFTNTTDTGVKTAKTVYTNITDTTKAVKKVQNAVVSVINYQESS
SSDSLNDLYGRIFGGGDSSDSSQENSKDSDGLQVAGEGSGVIYKKDGKEAYIVTNNHVVDGAKKLEIMLSDGSKITGELV
GKDTYSDLAVVKVSSDKITTVAEFADSNSLTVGEKAIAIGSPLGTEYANSVTEGIVSSLSRTITMQNDNGETVSTNAIQT
DAAINPGNSGGALVNIEGQVIGINSSKISSTSAVAGSAVEGMGFAIPSNDVVEIINQLEKDGKVTRPALGISIADLNSLS
SSATSKLDLPDEVKSGVVVGSVQKGMPADGKLQEYDVITEIDGKKISSKTDIQTNLYSHSIGDTIKVTFYRGKDKKTVDL
KLTKSTEDISD

Nucleotide


Download         Length: 1236 bp        

>NTDB_id=511408 STCNRZ1202_RS09350 WP_347229638.1 1788638..1789873(+) (htrA) [Streptococcus thermophilus strain CNRZ1202]
ATGAAAAAATTTAACTGGAAGAAAATAGTCGCGCCAATTGTAATGCTAATTATTGGCTTATTAGGTGGTTTACTTGGTGC
CTTTATCCTACTAACAGCAGCCGGGGTATCTTTTACCAATACAACAGATACTGGAGTAAAAACGGCTAAGACCGTCTACA
CCAATATAACAGATACAACTAAGGCTGTTAAGAAAGTACAAAATGCCGTTGTTTCTGTCATCAATTATCAAGAAAGTTCA
TCTTCAGATTCTCTAAATGACCTTTATGGCCGTATCTTTGGCGGAGGGGACAGTTCTGATTCTAGCCAAGAAAATTCAAA
AGATTCAGATGGCCTGCAGGTCGCTGGTGAAGGTTCTGGAGTCATCTATAAAAAAGATGGCAAAGAAGCCTACATCGTAA
CCAATAACCACGTTGTCGATGGGGCTAAAAAACTTGAAATCATGCTTTCGGATGGTTCGAAAATTACTGGTGAACTTGTT
GGTAAAGACACTTACTCTGACCTAGCAGTTGTCAAAGTATCTTCAGATAAAATAACAACTGTTGCAGAATTTGCAGACTC
AAACTCCCTTACTGTTGGTGAAAAAGCAATTGCTATTGGTAGCCCACTTGGTACCGAATACGCCAACTCAGTAACAGAAG
GAATCGTTTCTAGCCTTAGCCGTACTATAACGATGCAAAACGATAATGGTGAAACTGTATCAACAAACGCTATCCAAACA
GATGCAGCCATTAACCCTGGTAACTCTGGTGGTGCCCTAGTCAATATTGAAGGACAAGTTATCGGTATTAACTCAAGTAA
AATTTCATCAACGTCTGCAGTCGCTGGTAGTGCTGTTGAAGGTATGGGGTTTGCCATTCCATCAAACGATGTTGTTGAAA
TCATCAATCAATTAGAAAAAGATGGTAAAGTTACACGACCAGCACTAGGAATCTCAATAGCAGATCTTAATAGCCTTTCT
AGCAGCGCAACTTCTAAATTAGATTTACCAGATGAGGTCAAATCCGGTGTTGTTGTCGGTAGTGTTCAGAAAGGTATGCC
AGCTGACGGTAAACTTCAAGAATATGATGTTATCACTGAGATTGATGGTAAGAAAATCAGCTCAAAAACTGATATTCAAA
CCAATCTTTACAGCCATAGTATTGGAGATACTATCAAGGTAACCTTCTATCGTGGTAAAGATAAGAAAACTGTAGATCTT
AAATTAACAAAATCTACAGAAGACATATCTGATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

59.854

100

0.599

  htrA Streptococcus gordonii str. Challis substr. CH1

57.039

100

0.572

  htrA Streptococcus mitis NCTC 12261

54.034

99.513

0.538

  htrA Streptococcus pneumoniae TIGR4

53.79

99.513

0.535

  htrA Streptococcus pneumoniae D39

53.79

99.513

0.535

  htrA Streptococcus pneumoniae Rx1

53.79

99.513

0.535

  htrA Streptococcus pneumoniae R6

53.79

99.513

0.535