Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   STCNRZ1202_RS01000 Genome accession   NZ_CP065506
Coordinates   170428..171177 (+) Length   249 a.a.
NCBI ID   WP_011225365.1    Uniprot ID   Q5M699
Organism   Streptococcus thermophilus strain CNRZ1202     
Function   degradation of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 165428..176177
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STCNRZ1202_RS00970 (STCNRZ1202_00980) - 166003..166173 (+) 171 WP_172838670.1 hypothetical protein -
  STCNRZ1202_RS00975 (STCNRZ1202_00985) - 166260..166367 (+) 108 WP_002949251.1 LPXTG cell wall anchor domain-containing protein -
  STCNRZ1202_RS00980 (STCNRZ1202_00990) - 166454..167194 (-) 741 WP_002949253.1 amino acid ABC transporter ATP-binding protein -
  STCNRZ1202_RS00985 (STCNRZ1202_00995) - 167194..168744 (-) 1551 WP_022096528.1 ABC transporter substrate-binding protein/permease -
  STCNRZ1202_RS00990 (STCNRZ1202_01000) - 168947..169801 (+) 855 WP_347229659.1 undecaprenyl-diphosphate phosphatase -
  STCNRZ1202_RS00995 (STCNRZ1202_01005) - 169947..170162 (-) 216 WP_011226805.1 DUF3021 family protein -
  STCNRZ1202_RS01000 (STCNRZ1202_01010) mecA 170428..171177 (+) 750 WP_011225365.1 adaptor protein MecA Regulator
  STCNRZ1202_RS01005 (STCNRZ1202_01015) - 171181..172338 (+) 1158 WP_002947632.1 MraY family glycosyltransferase -
  STCNRZ1202_RS01010 (STCNRZ1202_01020) sufC 172499..173269 (+) 771 WP_002947634.1 Fe-S cluster assembly ATPase SufC -
  STCNRZ1202_RS01015 (STCNRZ1202_01025) sufD 173306..174568 (+) 1263 WP_002947640.1 Fe-S cluster assembly protein SufD -
  STCNRZ1202_RS01020 (STCNRZ1202_01030) - 174622..175854 (+) 1233 WP_002949261.1 cysteine desulfurase -

Sequence


Protein


Download         Length: 249 a.a.        Molecular weight: 29157.70 Da        Isoelectric Point: 4.0659

>NTDB_id=511355 STCNRZ1202_RS01000 WP_011225365.1 170428..171177(+) (mecA) [Streptococcus thermophilus strain CNRZ1202]
MEMKQINETTLKIMITMEDLEEHGMELKDFLIPQEKTEEFFYTVMDELDLPDNFKNSGMLSFRVTPRKDRVDVFVTKSDL
KEALDFNDLSDMEDYSGLSPEEFLKALEDNFMDKGDIEAHHKLEEHDKTLKEVDETMTEPAKEVAEETIREDYTHYVLAF
SDFDQVVTFAQGLKNVSVEGSEFYKLGDVYYMTILLYLADEPDYYANNMYARFLEYANVADRTRPYLQEHATILMEEDAL
PVLQATKWS

Nucleotide


Download         Length: 750 bp        

>NTDB_id=511355 STCNRZ1202_RS01000 WP_011225365.1 170428..171177(+) (mecA) [Streptococcus thermophilus strain CNRZ1202]
ATGGAAATGAAACAAATAAACGAGACAACTCTAAAAATCATGATTACCATGGAAGATCTTGAAGAACATGGTATGGAGCT
GAAAGATTTCTTGATTCCCCAGGAAAAAACAGAGGAATTTTTCTATACTGTCATGGATGAGTTGGACTTGCCTGATAACT
TTAAAAATAGTGGGATGTTGAGCTTCCGTGTCACGCCACGAAAGGATCGTGTGGATGTTTTTGTGACTAAATCAGATCTT
AAGGAAGCCCTTGATTTCAATGATTTGTCAGATATGGAAGACTATTCAGGACTTTCTCCAGAAGAATTCCTCAAAGCTCT
TGAAGATAACTTTATGGATAAGGGAGATATTGAAGCCCACCATAAGCTCGAAGAGCATGATAAGACCTTGAAAGAGGTTG
ATGAGACTATGACAGAGCCGGCTAAGGAAGTGGCTGAGGAAACTATTCGTGAAGATTATACTCACTATGTCTTGGCTTTC
TCTGACTTTGATCAAGTAGTGACCTTTGCGCAAGGTTTGAAGAATGTGTCAGTGGAAGGTTCTGAATTTTATAAACTTGG
TGATGTCTACTATATGACTATCCTTCTTTACTTGGCTGATGAGCCTGATTATTACGCGAACAATATGTATGCGCGTTTTC
TTGAATATGCGAATGTGGCAGACCGAACACGTCCCTATCTACAAGAGCATGCAACAATCTTGATGGAAGAGGACGCCTTA
CCGGTATTACAAGCAACGAAATGGAGCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q5M699

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Streptococcus thermophilus LMG 18311

100

100

1

  mecA Streptococcus thermophilus LMD-9

99.197

100

0.992

  mecA Streptococcus mutans UA159

57.377

97.992

0.562

  mecA Streptococcus pneumoniae Rx1

46.185

100

0.462

  mecA Streptococcus pneumoniae D39

46.185

100

0.462

  mecA Streptococcus pneumoniae R6

46.185

100

0.462

  mecA Streptococcus pneumoniae TIGR4

46.185

100

0.462