Detailed information NTG0510909

Bioinformatically predicted

Overview

• Name: amiD
• Type: Regulator
• Locus tag: ST4145_RS06665
• Genome accession: NZ_CP065492
• Coordinates: 1299622..1300548 (-)
• Length: 308 a.a.
• NCBI ID: WP_024010008.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain 4145
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1294622..1305548

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ST4145_RS06635 (ST4145_06575)	-	1294699..1295493 (-)	795	WP_024010002.1	HAD family hydrolase	-
ST4145_RS06640 (ST4145_06580)	-	1295678..1296055 (+)	378	WP_024010003.1	GntR family transcriptional regulator	-
ST4145_RS06645 (ST4145_06585)	-	1296060..1296758 (+)	699	WP_024010004.1	ABC transporter ATP-binding protein	-
ST4145_RS06650 (ST4145_06590)	-	1296770..1297555 (+)	786	WP_082245809.1	ABC transporter permease	-
ST4145_RS06655 (ST4145_06595)	amiF	1297605..1298534 (-)	930	WP_082245810.1	ATP-binding cassette domain-containing protein	Regulator
ST4145_RS06660 (ST4145_06600)	amiE	1298527..1299612 (-)	1086	WP_024010007.1	ABC transporter ATP-binding protein	Regulator
ST4145_RS06665 (ST4145_06605)	amiD	1299622..1300548 (-)	927	WP_024010008.1	oligopeptide ABC transporter permease OppC	Regulator
ST4145_RS06670 (ST4145_06610)	amiC	1300548..1302041 (-)	1494	WP_024010009.1	ABC transporter permease	Regulator
ST4145_RS06675 (ST4145_06615)	amiA3	1302102..1304075 (-)	1974	WP_024010010.1	peptide ABC transporter substrate-binding protein	Regulator
ST4145_RS06680 (ST4145_06620)	-	1304310..1304500 (-)	191	Protein_1261	IS3 family transposase	-
ST4145_RS06685	-	1304494..1304895 (-)	402	Protein_1262	ABC transporter ATP-binding protein	-
ST4145_RS06690 (ST4145_06635)	-	1304890..1305250 (-)	361	Protein_1263	TatD family hydrolase	-

Sequence

Protein

• Length: 308 a.a.
• Molecular weight: 34654.79 Da
• Isoelectric Point: 9.7054

>NTDB_id=510909 ST4145_RS06665 WP_024010008.1 1299622..1300548(-) (amiD) [Streptococcus thermophilus strain 4145]
MASIDKSKFQFVKRDDFASETIDAPSYSYWKSVMRQFFKKKSTVVMLGILIAIVLMSFIYPMFSKFDFNDVSKVNDFSLR
YVHPNAQYWFGTDGNGKSLFDSVWFGARNSILIAVIATFLNVIIGLLVGAVWGISKTFDMIMMEIYNIISNIPSLLVVIV
LTYSLGAGFWNMIFAMTVTGWIGIAYTIRIQIMRYRDLEYNLASRNLGTPTAKIVIKNIMPQLVSVIVTMASQLLSGFIS
YEAFLSYFGLGLPVTTPSLGRLISDYAQNVTVNAYLFWIPLTTLILVSLALFIIGQNLADASDPRTHR

Nucleotide

• Length: 927 bp

>NTDB_id=510909 ST4145_RS06665 WP_024010008.1 1299622..1300548(-) (amiD) [Streptococcus thermophilus strain 4145]
ATGGCTTCAATTGATAAAAGTAAGTTCCAATTTGTAAAGCGCGATGATTTTGCCTCTGAAACAATTGATGCACCGTCTTA
CTCATACTGGAAATCAGTGATGCGTCAATTTTTTAAAAAGAAATCAACAGTTGTAATGTTGGGAATCTTGATTGCTATTG
TTTTGATGAGTTTCATCTACCCAATGTTTTCTAAATTTGACTTCAATGATGTCTCAAAAGTAAATGATTTCAGTTTGCGT
TATGTACATCCAAACGCTCAATACTGGTTCGGTACTGACGGTAATGGTAAGTCTCTATTTGACAGTGTTTGGTTTGGGGC
TCGTAATTCTATCCTTATCGCTGTTATCGCTACCTTCCTGAATGTTATAATTGGTTTGCTTGTAGGTGCTGTTTGGGGGA
TTTCTAAGACCTTCGATATGATTATGATGGAAATCTACAACATCATCTCAAATATTCCCTCTCTCCTTGTGGTTATCGTC
TTGACTTACTCATTAGGTGCTGGTTTTTGGAATATGATTTTTGCCATGACCGTAACAGGTTGGATTGGTATTGCCTACAC
AATCCGTATTCAAATCATGCGTTATCGTGATTTGGAGTATAACTTGGCTTCTCGCAATTTGGGAACACCAACGGCTAAGA
TTGTGATTAAAAATATTATGCCACAACTTGTGTCAGTTATTGTAACCATGGCTAGTCAACTTTTGTCAGGATTTATCTCT
TATGAGGCCTTCCTTTCATACTTTGGTTTGGGTCTTCCTGTTACTACGCCTAGTCTTGGTCGTTTGATTTCAGACTATGC
ACAGAACGTTACAGTCAATGCCTATCTCTTCTGGATTCCATTGACTACCTTGATTCTTGTTTCTCTTGCTCTCTTTATTA
TTGGTCAAAACTTAGCGGATGCTAGTGACCCACGTACGCATAGATAG

Domains

Predicted by InterproScan.

• N-terminal TM domain of oligopeptide transport permease C (OppC_N) (28-71)

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (125-306)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiD	Streptococcus thermophilus LMG 18311	98.701	100	0.987
amiD	Streptococcus thermophilus LMD-9	98.701	100	0.987
amiD	Streptococcus salivarius strain HSISS4	95.779	100	0.958