Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   ST4145_RS07445 Genome accession   NZ_CP065492
Coordinates   1451828..1452559 (-) Length   243 a.a.
NCBI ID   WP_002951673.1    Uniprot ID   A0AAP2RM94
Organism   Streptococcus thermophilus strain 4145     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1446828..1457559
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ST4145_RS07420 (ST4145_07360) - 1447877..1449058 (+) 1182 WP_024010048.1 NAD(P)/FAD-dependent oxidoreductase -
  ST4145_RS07430 (ST4145_07370) trmB 1449294..1449935 (-) 642 WP_002947526.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  ST4145_RS07435 (ST4145_07375) - 1449945..1450736 (-) 792 WP_002951667.1 phosphotransferase family protein -
  ST4145_RS07440 (ST4145_07380) pptB 1450794..1451831 (-) 1038 WP_024010049.1 ABC transporter permease Regulator
  ST4145_RS07445 (ST4145_07385) pptA 1451828..1452559 (-) 732 WP_002951673.1 ABC transporter ATP-binding protein Regulator
  ST4145_RS07450 (ST4145_07390) - 1452624..1453043 (+) 420 WP_014621894.1 HIT family protein -
  ST4145_RS07455 (ST4145_07395) - 1453040..1453339 (+) 300 WP_014621895.1 hypothetical protein -
  ST4145_RS07460 (ST4145_07400) - 1453391..1454068 (-) 678 WP_011681532.1 hypothetical protein -
  ST4145_RS07465 (ST4145_07405) - 1454138..1454773 (-) 636 WP_011681533.1 DUF4230 domain-containing protein -
  ST4145_RS07470 - 1454792..1454917 (-) 126 WP_011681534.1 hypothetical protein -
  ST4145_RS07475 (ST4145_07410) - 1455339..1457438 (-) 2100 WP_011681535.1 ATP-dependent Clp protease ATP-binding subunit -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 26830.05 Da        Isoelectric Point: 4.4606

>NTDB_id=510914 ST4145_RS07445 WP_002951673.1 1451828..1452559(-) (pptA) [Streptococcus thermophilus strain 4145]
MLKLEKVTGGYANIPVLKDVTFEVADGELVGLIGLNGAGKSTTINEIIGLLTPYGGQIAIDGLTIQQDPASYRQKIGYIP
ETPSLYEELTLREHLETVLMAYGLDVTEGMARADKYLKLFRLDEKLDWFPTQFSKGMKQKVMIICAFIVNPSLFIVDEPF
LGLDPLAISDLIELLAEEKANGKSILMSTHVLDSAEKMCDRFVILHHGQILAQGTIDELRQTFGDSSASLNDIYMQLTKG
ELS

Nucleotide


Download         Length: 732 bp        

>NTDB_id=510914 ST4145_RS07445 WP_002951673.1 1451828..1452559(-) (pptA) [Streptococcus thermophilus strain 4145]
ATGCTTAAATTAGAAAAGGTGACGGGTGGTTATGCCAATATTCCCGTCCTAAAAGATGTCACTTTTGAGGTGGCTGATGG
TGAATTGGTTGGTCTCATTGGTCTTAATGGTGCTGGGAAATCAACAACAATTAACGAGATTATTGGTCTCTTAACACCCT
ATGGAGGACAGATTGCCATTGATGGGTTAACTATTCAACAAGATCCAGCTAGCTATCGTCAGAAGATTGGCTATATTCCT
GAAACGCCAAGTCTTTATGAAGAATTGACGCTTCGTGAACATTTGGAAACGGTGTTGATGGCCTATGGTCTTGATGTGAC
TGAGGGTATGGCACGTGCGGACAAGTACCTCAAACTCTTTCGCTTAGATGAAAAGTTGGACTGGTTCCCGACTCAGTTTT
CAAAAGGGATGAAGCAGAAGGTCATGATTATCTGCGCCTTTATTGTCAATCCAAGTCTTTTCATTGTTGATGAGCCCTTT
TTGGGATTGGATCCCTTGGCGATTTCTGATTTGATTGAGCTTCTGGCTGAGGAAAAAGCCAATGGCAAGTCTATTCTCAT
GTCGACTCACGTTTTGGATTCAGCTGAGAAGATGTGTGATCGCTTTGTGATTTTGCACCATGGACAGATCTTGGCACAGG
GGACGATTGATGAGCTTCGTCAGACCTTTGGTGACAGTAGTGCTAGTCTTAACGATATCTATATGCAGTTGACTAAGGGA
GAATTGTCATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

100

100

1
  pptA Streptococcus salivarius strain HSISS4

97.119

100

0.971