Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   ST90730_RS09370 Genome accession   NZ_CP065481
Coordinates   1793814..1795049 (+) Length   411 a.a.
NCBI ID   WP_347106898.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain 90730     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1788814..1800049
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ST90730_RS09340 (ST90730_09360) - 1789280..1791886 (+) 2607 WP_011226710.1 YfhO family protein -
  ST90730_RS09360 (ST90730_09380) - 1792431..1793114 (-) 684 WP_011226711.1 YoaK family protein -
  ST90730_RS09365 (ST90730_09385) rlmH 1793130..1793609 (-) 480 WP_011226712.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  ST90730_RS09370 (ST90730_09390) htrA 1793814..1795049 (+) 1236 WP_347106898.1 trypsin-like peptidase domain-containing protein Regulator
  ST90730_RS09375 (ST90730_09395) spo0J 1795115..1795882 (+) 768 WP_011226714.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 411 a.a.        Molecular weight: 42799.10 Da        Isoelectric Point: 4.7061

>NTDB_id=510276 ST90730_RS09370 WP_347106898.1 1793814..1795049(+) (htrA) [Streptococcus thermophilus strain 90730]
MKKFNWKKIVAPIAMLIIGLLGGLLGAFILLTAAGVSFTNTTDTGVKTAKTVYTNITDTTKAVKKVQNAVVSVINYQEGS
SSDSLNDLYGRIFGGGDSSDSSQENSKDSDGLQVAGEGSGVIYKKDGKEAYIVTNNHVVDGAKKLEIMLSDGSKITGELV
GKDTCSDLAVVKVSSDKITTVAEFADSNSLTVGEKAIAIGSPLGTEYANSVTEGIVSSLSRTITMQNDNGETVSTNAIQT
DAAINPGNSGGALVNIEGQVIGINSSKISSTSAVAGSAVEGMGFAIPSNDVVEIINQLEKDGKVTRPALGISIADLNSLS
SSATSKLDLPDEVKSGVVVGSVQKGMPADGKLQEYDVITEIDGKKISSKTDIQTNLYSHSIGDTIKVTFYRGKDKKTVDL
KLTKSTEDISD

Nucleotide


Download         Length: 1236 bp        

>NTDB_id=510276 ST90730_RS09370 WP_347106898.1 1793814..1795049(+) (htrA) [Streptococcus thermophilus strain 90730]
ATGAAAAAATTTAACTGGAAGAAAATAGTCGCGCCAATTGCAATGCTAATTATTGGCTTACTAGGTGGTTTACTTGGTGC
CTTTATCCTACTAACAGCAGCCGGGGTATCTTTTACCAATACAACAGATACTGGAGTAAAAACGGCTAAGACCGTCTACA
CCAATATAACAGATACAACTAAGGCTGTTAAGAAAGTACAAAATGCCGTTGTTTCTGTCATCAATTATCAAGAAGGTTCA
TCTTCAGATTCTCTAAATGACCTTTATGGCCGTATCTTTGGCGGAGGGGACAGTTCTGATTCTAGCCAAGAAAATTCAAA
AGATTCAGATGGTCTACAGGTCGCTGGTGAAGGTTCTGGAGTCATCTATAAAAAAGATGGCAAAGAAGCCTACATCGTAA
CCAATAACCATGTTGTCGATGGGGCTAAAAAACTTGAAATCATGCTTTCGGATGGTTCGAAAATTACTGGTGAACTTGTT
GGTAAAGACACTTGCTCTGACCTAGCAGTTGTCAAAGTATCTTCAGATAAAATAACAACTGTTGCAGAATTTGCAGACTC
AAACTCCCTTACTGTTGGTGAAAAAGCAATTGCTATCGGTAGCCCACTTGGTACCGAATACGCCAACTCAGTAACAGAAG
GAATCGTTTCTAGCCTTAGCCGTACTATAACGATGCAAAACGATAATGGTGAAACTGTATCAACAAACGCTATCCAAACA
GATGCAGCCATTAACCCTGGTAACTCTGGTGGTGCCCTAGTCAATATTGAAGGACAAGTTATCGGTATTAATTCAAGTAA
AATTTCATCAACGTCTGCAGTCGCTGGTAGTGCTGTTGAAGGTATGGGGTTTGCCATTCCATCAAACGATGTTGTTGAAA
TCATCAATCAATTAGAAAAAGATGGTAAAGTTACACGACCAGCACTAGGAATCTCAATAGCAGATCTTAATAGCCTTTCT
AGCAGCGCAACTTCTAAATTAGATTTACCAGATGAGGTCAAATCCGGTGTTGTTGTCGGTAGTGTTCAGAAAGGTATGCC
AGCTGACGGTAAACTTCAAGAATATGATGTTATCACTGAGATTGATGGTAAGAAAATCAGCTCAAAAACTGATATTCAAA
CCAATCTTTACAGCCATAGTATCGGAGATACTATCAAGGTAACCTTCTATCGTGGTAAAGATAAGAAAACTGTAGATCTT
AAATTAACAAAATCTACAGAAGACATATCTGATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

61.538

98.054

0.603

  htrA Streptococcus gordonii str. Challis substr. CH1

57.039

100

0.572

  htrA Streptococcus mitis NCTC 12261

53.79

99.513

0.535

  htrA Streptococcus pneumoniae TIGR4

53.545

99.513

0.533

  htrA Streptococcus pneumoniae D39

53.545

99.513

0.533

  htrA Streptococcus pneumoniae Rx1

53.545

99.513

0.533

  htrA Streptococcus pneumoniae R6

53.545

99.513

0.533