Detailed information
Bioinformatically predicted
Overview
| Name | comA | Type | Regulator |
| Locus tag | ST1A_RS01500 | Genome accession | NZ_CP065384 |
| Coordinates | 273784..274074 (+) | Length | 96 a.a. |
| NCBI ID | WP_194238295.1 | Uniprot ID | - |
| Organism | Streptococcus thermophilus strain 1A | ||
| Function | processing and transport of ComC (predicted from homology) Competence regulation |
||
Genomic Context
Location: 268784..279074
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ST1A_RS01475 (ST1A_01475) | - | 269856..270365 (+) | 510 | WP_011680717.1 | tRNA (cytidine(34)-2'-O)-methyltransferase | - |
| ST1A_RS01480 (ST1A_01480) | - | 270676..271233 (+) | 558 | WP_011680718.1 | ECF transporter S component | - |
| ST1A_RS01485 (ST1A_01485) | - | 271236..271886 (+) | 651 | WP_011680719.1 | phosphatase PAP2 family protein | - |
| ST1A_RS01490 (ST1A_01490) | comR | 272081..272980 (+) | 900 | WP_011680720.1 | helix-turn-helix domain-containing protein | Regulator |
| ST1A_RS01495 | - | 273218..273799 (+) | 582 | Protein_241 | cysteine peptidase family C39 domain-containing protein | - |
| ST1A_RS01500 | comA | 273784..274074 (+) | 291 | WP_194238295.1 | ABC transporter transmembrane domain-containing protein | Regulator |
| ST1A_RS01505 | comA | 274417..274626 (+) | 210 | WP_002946147.1 | hypothetical protein | Regulator |
| ST1A_RS01510 (ST1A_01510) | - | 274681..275249 (+) | 569 | Protein_244 | ATP-binding cassette domain-containing protein | - |
| ST1A_RS01515 | - | 275480..275668 (+) | 189 | WP_224103239.1 | hypothetical protein | - |
| ST1A_RS01520 | - | 276161..276463 (-) | 303 | WP_224103194.1 | hypothetical protein | - |
| ST1A_RS01525 | - | 276687..277058 (-) | 372 | WP_224103195.1 | hypothetical protein | - |
| ST1A_RS01530 (ST1A_01525) | - | 277464..277979 (+) | 516 | WP_002949547.1 | AmiS/UreI family transporter | - |
| ST1A_RS01535 (ST1A_01530) | - | 278004..278306 (+) | 303 | WP_002886558.1 | urease subunit gamma | - |
| ST1A_RS01540 (ST1A_01535) | - | 278318..278629 (+) | 312 | WP_002886559.1 | urease subunit beta | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10752.77 Da Isoelectric Point: 7.1599
>NTDB_id=509072 ST1A_RS01500 WP_194238295.1 273784..274074(+) (comA) [Streptococcus thermophilus strain 1A]
MLAYLAQQVFTFFKDYLLHRLGNYFSISVILPYIKHVLSLPISFFGSRRTGEITSCFGDANTIIDALASTILSIFLDVTI
VITLAVALILQTVLFF
MLAYLAQQVFTFFKDYLLHRLGNYFSISVILPYIKHVLSLPISFFGSRRTGEITSCFGDANTIIDALASTILSIFLDVTI
VITLAVALILQTVLFF
Nucleotide
Download Length: 291 bp
>NTDB_id=509072 ST1A_RS01500 WP_194238295.1 273784..274074(+) (comA) [Streptococcus thermophilus strain 1A]
GTGCTCGCCTATCTAGCCCAACAAGTCTTCACTTTTTTCAAAGATTATCTTCTACATCGATTGGGTAATTACTTCTCCAT
TTCTGTTATCCTTCCTTATATCAAGCATGTCCTTTCTTTGCCCATTAGTTTCTTCGGTTCACGTCGTACTGGTGAAATCA
CGTCATGTTTTGGAGATGCCAACACTATTATCGATGCTCTAGCTTCAACAATCTTATCGATTTTCCTAGATGTCACCATT
GTGATAACTTTAGCTGTCGCCCTTATTTTACAAACCGTTCTCTTTTTTTGA
GTGCTCGCCTATCTAGCCCAACAAGTCTTCACTTTTTTCAAAGATTATCTTCTACATCGATTGGGTAATTACTTCTCCAT
TTCTGTTATCCTTCCTTATATCAAGCATGTCCTTTCTTTGCCCATTAGTTTCTTCGGTTCACGTCGTACTGGTGAAATCA
CGTCATGTTTTGGAGATGCCAACACTATTATCGATGCTCTAGCTTCAACAATCTTATCGATTTTCCTAGATGTCACCATT
GTGATAACTTTAGCTGTCGCCCTTATTTTACAAACCGTTCTCTTTTTTTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comA | Streptococcus gordonii str. Challis substr. CH1 |
59.794 |
100 |
0.604 |
| comA | Streptococcus pneumoniae D39 |
58.763 |
100 |
0.594 |
| comA | Streptococcus pneumoniae R6 |
58.763 |
100 |
0.594 |
| comA | Streptococcus mitis SK321 |
58.763 |
100 |
0.594 |
| comA | Streptococcus mitis NCTC 12261 |
58.763 |
100 |
0.594 |
| comA | Streptococcus pneumoniae TIGR4 |
58.763 |
100 |
0.594 |
| comA | Streptococcus pneumoniae Rx1 |
58.763 |
100 |
0.594 |
| comA/nlmT | Streptococcus mutans UA159 |
57.732 |
100 |
0.583 |