Detailed information NTG0507423

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: BTD91_RS07500
• Genome accession: NZ_CP065150
• Coordinates: 1712842..1713846 (-)
• Length: 334 a.a.
• NCBI ID: WP_017055857.1
• Uniprot ID: A0A2N7JD19
• Organism: Vibrio kanaloae strain R17
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 1707842..1718846

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BTD91_RS07470 (BTD91_07470)	zapB	1707987..1708229 (+)	243	WP_009848877.1	cell division protein ZapB	-
BTD91_RS07475 (BTD91_07475)	rraA	1708318..1708833 (-)	516	WP_017055862.1	ribonuclease E activity regulator RraA	-
BTD91_RS07480 (BTD91_07480)	-	1708907..1709824 (-)	918	WP_029626911.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
BTD91_RS07485 (BTD91_07485)	hslU	1710014..1711354 (-)	1341	WP_017055860.1	HslU--HslV peptidase ATPase subunit	-
BTD91_RS07490 (BTD91_07490)	hslV	1711413..1711961 (-)	549	WP_017055859.1	ATP-dependent protease subunit HslV	-
BTD91_RS07495 (BTD91_07495)	ftsN	1712186..1712719 (-)	534	WP_017055858.1	cell division protein FtsN	-
BTD91_RS07500 (BTD91_07500)	cytR	1712842..1713846 (-)	1005	WP_017055857.1	DNA-binding transcriptional regulator CytR	Regulator
BTD91_RS07505 (BTD91_07505)	priA	1714086..1716287 (-)	2202	WP_077680958.1	primosomal protein N'	-
BTD91_RS07510 (BTD91_07510)	rpmE	1716630..1716848 (+)	219	WP_017055855.1	50S ribosomal protein L31	-
BTD91_RS07515 (BTD91_07515)	-	1717199..1718488 (+)	1290	WP_077680957.1	malic enzyme-like NAD(P)-binding protein	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36548.06 Da
• Isoelectric Point: 6.8459

>NTDB_id=507423 BTD91_RS07500 WP_017055857.1 1712842..1713846(-) (cytR) [Vibrio kanaloae strain R17]
MATMKDVAQLAGVSTATVSRALMTPEKVSVSTRKRVEAAVLEAGYSPNTLARNLRRNESKTIITIVPDICDPYFAEIIRG
IEDAAVENDYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDHPFDVSKSEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLAQLGHKRIAQISGPTSATLCKFRQQGYQQALRRAGVSMNPAYSTVGDFTFEAGTKAVRQLLALPEQPTA
IFCHNDSMAIGAIQEAKKLGLRVPQDLSIVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLDLLKGNDVQTGSRLLE
AKLVVRGSTAPPRI

Nucleotide

• Length: 1005 bp

>NTDB_id=507423 BTD91_RS07500 WP_017055857.1 1712842..1713846(-) (cytR) [Vibrio kanaloae strain R17]
ATGGCGACAATGAAGGATGTTGCCCAGCTAGCAGGCGTCTCAACCGCAACGGTATCACGTGCATTGATGACCCCAGAGAA
AGTCTCAGTTTCTACTCGCAAACGAGTAGAGGCAGCAGTACTTGAAGCTGGATACTCACCCAACACATTAGCTCGAAACT
TACGTCGCAACGAATCAAAAACCATCATTACTATCGTTCCTGATATCTGTGACCCTTATTTCGCCGAAATCATTCGTGGT
ATCGAAGATGCAGCTGTAGAAAATGATTACCTAGTTCTGCTTGGCGACAGTGGTCAACAGAAGAAACGTGAATCATCATT
CGTAAACTTGGTGTTCACCAAACAGGCTGATGGCATGCTACTGCTTGGCACCGACCACCCATTTGATGTCAGTAAATCTG
AACAGAAGAACTTACCACCTATGGTGATGGCATGTGAGTTTGCACCTGAACTTGAGTTGCCAACGGTACACATCGATAAC
TTGACGTCTGCATTTGAAGCCGTCAACTACCTAGCTCAGTTAGGTCATAAGCGCATCGCACAAATATCCGGCCCAACCTC
CGCCACTCTATGTAAATTCCGCCAGCAAGGCTACCAACAGGCATTGCGCCGGGCTGGTGTATCAATGAACCCAGCTTATA
GTACTGTTGGTGATTTTACCTTTGAAGCTGGAACAAAAGCCGTTCGTCAATTATTAGCACTACCGGAACAACCAACCGCA
ATTTTCTGTCATAACGATTCAATGGCAATTGGTGCTATTCAAGAAGCAAAAAAATTAGGTTTGCGTGTTCCTCAAGATCT
CTCCATTGTTGGTTTTGATGACATCCAATTCGCTCAATACTGCGATCCACCACTAACGACCATTTCTCAGCCTCGTTACG
AAATCGGACGCCAAGCGATGCTGATGATGCTCGACCTACTTAAAGGTAACGATGTTCAAACAGGTTCACGCCTACTTGAA
GCTAAACTCGTGGTTCGTGGCAGTACAGCGCCACCTCGAATTTAG

Domains

Predicted by InterproScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-329)

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

3D structure

• AlphaFold DB: A0A2N7JD19

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	88.855	99.401	0.883
cytR	Vibrio parahaemolyticus RIMD 2210633	87.087	99.701	0.868