Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | SMULJ23_RS01100 | Genome accession | NC_017768 |
| Coordinates | 252887..253840 (+) | Length | 317 a.a. |
| NCBI ID | WP_002264244.1 | Uniprot ID | A0AAX1K2T6 |
| Organism | Streptococcus mutans LJ23 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 247887..258840
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SMULJ23_RS01060 (SMULJ23_0192) | - | 248653..249036 (+) | 384 | WP_002263434.1 | DUF1033 family protein | - |
| SMULJ23_RS01065 (SMULJ23_0193) | comYA | 249166..250107 (+) | 942 | WP_002263435.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| SMULJ23_RS01070 (SMULJ23_0194) | comYB | 250043..251074 (+) | 1032 | WP_255264922.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| SMULJ23_RS01075 (SMULJ23_0195) | comYC | 251074..251388 (+) | 315 | WP_002263437.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| SMULJ23_RS01080 (SMULJ23_0196) | comYD | 251375..251779 (+) | 405 | WP_002263438.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| SMULJ23_RS01085 (SMULJ23_0197) | comYE | 251751..252044 (+) | 294 | WP_002263439.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| SMULJ23_RS01090 (SMULJ23_0198) | comYF | 252031..252465 (+) | 435 | WP_002274770.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| SMULJ23_RS01095 (SMULJ23_0199) | comYG | 252443..252832 (+) | 390 | WP_002263441.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| SMULJ23_RS01100 (SMULJ23_0200) | comYH | 252887..253840 (+) | 954 | WP_002264244.1 | class I SAM-dependent methyltransferase | Machinery gene |
| SMULJ23_RS01105 (SMULJ23_0201) | - | 253899..255098 (+) | 1200 | WP_002263443.1 | acetate kinase | - |
| SMULJ23_RS01110 | tnpA | 255311..255774 (+) | 464 | Protein_198 | IS200/IS605 family transposase | - |
| SMULJ23_RS01115 (SMULJ23_0204) | - | 256407..256652 (+) | 246 | WP_002263444.1 | helix-turn-helix transcriptional regulator | - |
| SMULJ23_RS01120 (SMULJ23_0205) | - | 256621..257061 (+) | 441 | WP_002264006.1 | hypothetical protein | - |
| SMULJ23_RS01125 (SMULJ23_0206) | - | 257114..257776 (+) | 663 | WP_002263446.1 | type II CAAX endopeptidase family protein | - |
| SMULJ23_RS01130 (SMULJ23_0207) | proC | 257861..258631 (-) | 771 | WP_002263447.1 | pyrroline-5-carboxylate reductase | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 36258.54 Da Isoelectric Point: 5.2379
>NTDB_id=50736 SMULJ23_RS01100 WP_002264244.1 252887..253840(+) (comYH) [Streptococcus mutans LJ23]
MDFEKIEAAYNLLLDNCQRLETQLHTHLYDALIEQNACYLGAEGADDFIKENNKKLRQLNLSKEEWRRSFQFIFIKATQS
QQLQSNHQFTPDSIGFIILYLLEGLTNKSQLDIIEIGSGTGNLAETIVNNSSKSIDYMGIEVDDLLIDLSASIADVLDSS
VHFVQEDAVRPQILKESDVIISDLPVGFYPNDKIAQRYQVAAKLGHTYAHHLLMEQSLKYLKKEGLAIFLAPVDLLTSEQ
SPLLKKWLQNNVTILAVISLPEAIFKQKSNIKSIFVLKKQSQQSLESFVYPLTDLQDPEVLRRFMKNFKKWKEDNVF
MDFEKIEAAYNLLLDNCQRLETQLHTHLYDALIEQNACYLGAEGADDFIKENNKKLRQLNLSKEEWRRSFQFIFIKATQS
QQLQSNHQFTPDSIGFIILYLLEGLTNKSQLDIIEIGSGTGNLAETIVNNSSKSIDYMGIEVDDLLIDLSASIADVLDSS
VHFVQEDAVRPQILKESDVIISDLPVGFYPNDKIAQRYQVAAKLGHTYAHHLLMEQSLKYLKKEGLAIFLAPVDLLTSEQ
SPLLKKWLQNNVTILAVISLPEAIFKQKSNIKSIFVLKKQSQQSLESFVYPLTDLQDPEVLRRFMKNFKKWKEDNVF
Nucleotide
Download Length: 954 bp
>NTDB_id=50736 SMULJ23_RS01100 WP_002264244.1 252887..253840(+) (comYH) [Streptococcus mutans LJ23]
ATGGATTTTGAAAAAATAGAAGCTGCCTATAACTTACTGTTAGATAATTGTCAAAGGCTGGAAACTCAACTTCATACTCA
CCTTTATGATGCCTTAATTGAGCAAAATGCTTGCTATCTAGGTGCTGAAGGTGCTGATGATTTTATTAAAGAAAATAATA
AAAAACTGCGTCAGCTTAATCTAAGTAAAGAGGAGTGGCGTCGTAGTTTTCAATTTATTTTTATTAAGGCTACTCAAAGT
CAGCAATTACAGTCAAATCACCAATTTACACCAGATAGTATTGGTTTTATTATTCTTTATTTATTGGAAGGTTTAACAAA
TAAGAGTCAGTTAGACATCATTGAAATTGGTTCTGGGACAGGAAATCTTGCAGAGACTATTGTGAATAACAGTTCAAAAA
GCATTGATTATATGGGGATTGAGGTTGACGATCTGTTAATTGATTTATCAGCAAGTATTGCCGATGTATTGGATTCTTCT
GTGCATTTTGTTCAAGAAGATGCAGTGCGGCCTCAGATTTTAAAAGAAAGTGATGTCATTATCAGTGATCTGCCAGTTGG
CTTTTATCCCAATGATAAAATTGCTCAGCGTTATCAGGTTGCAGCCAAGTTAGGACATACTTATGCACATCATCTTTTGA
TGGAGCAATCGCTTAAGTATTTAAAAAAAGAGGGACTTGCTATTTTTTTAGCGCCAGTGGATCTTTTAACTAGTGAGCAG
AGTCCTTTGCTTAAAAAGTGGTTACAGAACAATGTAACTATTTTAGCCGTTATTTCTTTACCTGAGGCAATTTTTAAACA
GAAAAGTAATATAAAGTCAATCTTTGTCTTAAAGAAACAATCGCAACAAAGTTTGGAAAGTTTTGTCTATCCTTTGACAG
ATTTACAAGACCCCGAAGTTTTAAGACGATTTATGAAAAATTTTAAAAAGTGGAAGGAAGATAATGTCTTTTAA
ATGGATTTTGAAAAAATAGAAGCTGCCTATAACTTACTGTTAGATAATTGTCAAAGGCTGGAAACTCAACTTCATACTCA
CCTTTATGATGCCTTAATTGAGCAAAATGCTTGCTATCTAGGTGCTGAAGGTGCTGATGATTTTATTAAAGAAAATAATA
AAAAACTGCGTCAGCTTAATCTAAGTAAAGAGGAGTGGCGTCGTAGTTTTCAATTTATTTTTATTAAGGCTACTCAAAGT
CAGCAATTACAGTCAAATCACCAATTTACACCAGATAGTATTGGTTTTATTATTCTTTATTTATTGGAAGGTTTAACAAA
TAAGAGTCAGTTAGACATCATTGAAATTGGTTCTGGGACAGGAAATCTTGCAGAGACTATTGTGAATAACAGTTCAAAAA
GCATTGATTATATGGGGATTGAGGTTGACGATCTGTTAATTGATTTATCAGCAAGTATTGCCGATGTATTGGATTCTTCT
GTGCATTTTGTTCAAGAAGATGCAGTGCGGCCTCAGATTTTAAAAGAAAGTGATGTCATTATCAGTGATCTGCCAGTTGG
CTTTTATCCCAATGATAAAATTGCTCAGCGTTATCAGGTTGCAGCCAAGTTAGGACATACTTATGCACATCATCTTTTGA
TGGAGCAATCGCTTAAGTATTTAAAAAAAGAGGGACTTGCTATTTTTTTAGCGCCAGTGGATCTTTTAACTAGTGAGCAG
AGTCCTTTGCTTAAAAAGTGGTTACAGAACAATGTAACTATTTTAGCCGTTATTTCTTTACCTGAGGCAATTTTTAAACA
GAAAAGTAATATAAAGTCAATCTTTGTCTTAAAGAAACAATCGCAACAAAGTTTGGAAAGTTTTGTCTATCCTTTGACAG
ATTTACAAGACCCCGAAGTTTTAAGACGATTTATGAAAAATTTTAAAAAGTGGAAGGAAGATAATGTCTTTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA159 |
99.685 |
100 |
0.997 |
| comYH | Streptococcus mutans UA140 |
99.685 |
100 |
0.997 |