Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   SANR_RS03330 Genome accession   NC_022239
Coordinates   671055..672824 (+) Length   589 a.a.
NCBI ID   WP_003037521.1    Uniprot ID   I0SBG2
Organism   Streptococcus anginosus C238     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 666055..677824
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SANR_RS03305 (SANR_0648) - 666353..666583 (+) 231 WP_018543445.1 DUF1146 family protein -
  SANR_RS03310 (SANR_0649) murA 666622..667902 (+) 1281 WP_003037494.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  SANR_RS03315 - 667895..668071 (+) 177 WP_003037331.1 DNA-directed RNA polymerase subunit beta -
  SANR_RS03320 (SANR_0650) endA 668172..669017 (+) 846 WP_020999531.1 DNA/RNA non-specific endonuclease Machinery gene
  SANR_RS03325 (SANR_0651) - 669309..671045 (+) 1737 WP_003037228.1 ABC transporter ATP-binding protein -
  SANR_RS03330 (SANR_0652) rcrQ 671055..672824 (+) 1770 WP_003037521.1 ABC transporter ATP-binding protein Regulator
  SANR_RS03335 (SANR_0653) - 673239..674240 (-) 1002 WP_003037347.1 YdcF family protein -
  SANR_RS03345 - 674972..675352 (+) 381 WP_003037448.1 CidA/LrgA family protein -
  SANR_RS03350 (SANR_0655) - 675345..676040 (+) 696 WP_003037392.1 LrgB family protein -
  SANR_RS03355 (SANR_0656) - 676158..676670 (+) 513 WP_003037315.1 adenine phosphoribosyltransferase -
  SANR_RS03360 (SANR_0657) metA 676770..677714 (+) 945 WP_003037498.1 homoserine O-acetyltransferase MetA -

Sequence

Protein


Download         Length: 589 a.a.        Molecular weight: 66237.48 Da        Isoelectric Point: 5.5341

>NTDB_id=50733 SANR_RS03330 WP_003037521.1 671055..672824(+) (rcrQ) [Streptococcus anginosus C238]
MKQHSFMRLWSYLKVYKLSVILAIFLKVVSIVMSVLEPFVLGLAITELTRNVLDMAKGVEGASINTTYVFWVMALYLLRG
LFYEIGAYYSNYFMTNAVQNTVRDMRNELSSKINQIPVSYFDKHQFGDLLGRFTSDVETVSNALQQSFLQVVNAVLTITL
VIGMVLYLNFQLALIVIASIPLTYFGATFILKKSQPYFKKQADTLGVMNGFVQENLTGFNVLKLYGREETSSDDFREITQ
KLQEVGFKASFISGLMMPILNAVSDLTYLLVAVVGGLQVISGQLTIGNMQAFVQYVWQVNQPIQNLTQLAGQLQSAKSSL
DRVFQVLDEPDEVTDAKEWLEHDLTGQVSFKHVDFQYVENKPLIRDFNLEVKPGEMVAIVGPTGAGKTTLINLLMRFYDV
TAGSISVDGHDIRNLSRQDYRKQFGMVLQDAWLYEGTVKENLRFGNLNATDEEIVEAAKAANVDHFIRTLPGGYNMEMNQ
ESSNISLGQKQLLTIARALLADPKILILDEATSSVDTRLELLIQKAMKNLMQGRTSFVIAHRLSTIQEADKILVLKDGQI
IEQGTHESLLADKGFYYDLYTSQFAKKEA

Nucleotide


Download         Length: 1770 bp        

>NTDB_id=50733 SANR_RS03330 WP_003037521.1 671055..672824(+) (rcrQ) [Streptococcus anginosus C238]
ATGAAACAACATAGTTTTATGCGCTTGTGGAGTTATTTAAAAGTTTATAAACTCTCAGTAATCCTTGCTATCTTTTTGAA
GGTGGTGAGTATTGTGATGAGCGTGCTAGAGCCTTTTGTACTTGGTCTTGCTATTACAGAATTGACACGAAATGTATTGG
ATATGGCAAAAGGAGTCGAAGGCGCCAGTATAAACACAACATATGTCTTTTGGGTAATGGCACTTTACCTTTTGCGTGGT
TTGTTCTATGAAATTGGGGCTTACTATTCGAATTATTTTATGACCAATGCGGTGCAAAATACAGTACGTGACATGCGCAA
TGAGTTGAGTTCTAAAATTAATCAAATTCCAGTTTCTTACTTTGATAAGCATCAATTTGGAGATTTGCTAGGGCGCTTTA
CCAGTGATGTAGAGACTGTTTCAAATGCGCTTCAACAATCATTCTTACAAGTTGTAAATGCGGTTTTGACCATTACCTTA
GTTATCGGAATGGTCTTGTATCTTAATTTTCAACTGGCTTTGATAGTGATTGCTAGCATTCCATTGACCTATTTTGGGGC
GACTTTTATTTTGAAAAAATCACAACCGTATTTTAAAAAGCAAGCAGATACGCTAGGTGTCATGAATGGATTTGTTCAAG
AAAATCTAACTGGTTTTAATGTGCTGAAACTCTATGGTCGTGAAGAAACATCTTCAGACGATTTTCGAGAAATCACGCAA
AAACTCCAAGAAGTCGGGTTCAAAGCTAGTTTTATTTCTGGCTTGATGATGCCAATTTTGAACGCCGTTTCAGATTTGAC
TTATCTGCTTGTAGCAGTTGTTGGTGGTCTGCAAGTCATTTCTGGACAATTAACGATTGGGAACATGCAAGCATTCGTAC
AATATGTGTGGCAAGTAAACCAACCAATCCAAAACCTAACGCAATTGGCTGGGCAATTGCAGAGTGCTAAGTCTTCGCTG
GATCGTGTTTTCCAAGTCTTGGATGAACCAGACGAAGTAACAGATGCGAAAGAGTGGCTGGAACATGATTTGACAGGTCA
GGTCAGCTTCAAGCATGTTGACTTTCAATACGTGGAAAACAAACCGCTCATTCGAGACTTCAACTTAGAGGTTAAGCCGG
GCGAAATGGTGGCGATTGTCGGTCCAACCGGTGCCGGAAAGACCACCCTTATCAATCTGCTCATGCGTTTTTATGATGTA
ACAGCAGGTTCAATTTCTGTGGATGGTCACGATATTCGCAACTTATCGCGCCAAGATTACCGCAAACAATTTGGTATGGT
CTTGCAAGACGCTTGGCTTTATGAAGGAACAGTCAAAGAAAACTTGCGCTTTGGGAATCTGAATGCGACAGATGAAGAGA
TTGTGGAAGCCGCCAAAGCAGCTAATGTCGATCATTTCATTCGGACGCTTCCAGGTGGCTATAATATGGAAATGAATCAG
GAATCCAGCAATATTTCGCTAGGACAAAAACAATTGCTGACCATCGCGCGAGCACTATTAGCCGATCCAAAAATCTTGAT
TTTGGATGAAGCAACCTCGTCCGTTGATACACGCCTAGAGCTCTTGATTCAAAAAGCGATGAAGAACCTCATGCAAGGAC
GAACAAGCTTTGTCATTGCTCACCGCTTATCGACGATTCAAGAGGCGGACAAGATTTTGGTTCTCAAAGACGGGCAAATC
ATTGAGCAAGGAACTCACGAATCGCTTTTAGCTGATAAAGGTTTCTATTACGACTTATATACAAGTCAGTTTGCTAAGAA
AGAAGCCTAA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(20-302)

ABC transporter (ABC_tran)

(365-513)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I0SBG2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

44.013

100

0.443

Multiple sequence alignment