Detailed information NTG0506545

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: I2436_RS04900
• Genome accession: NZ_CP065060
• Coordinates: 1036604..1037449 (+)
• Length: 281 a.a.
• NCBI ID: WP_012515603.1
• Uniprot ID: -
• Organism: Streptococcus equi subsp. zooepidemicus strain SEZ28
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1031604..1042449

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I2436_RS04885 (GDAKBCAL_00975)	-	1033087..1033719 (+)	633	WP_165623381.1	ABC transporter ATP-binding protein	-
I2436_RS09685	-	1034126..1034362 (+)	237	Protein_938	DNA-binding protein	-
I2436_RS04890 (GDAKBCAL_00976)	ylqF	1034731..1035585 (+)	855	WP_012515601.1	ribosome biogenesis GTPase YlqF	-
I2436_RS04895 (GDAKBCAL_00977)	-	1035566..1036348 (+)	783	WP_165623389.1	ribonuclease HII	-
I2436_RS04900 (GDAKBCAL_00978)	dprA	1036604..1037449 (+)	846	WP_012515603.1	DNA-processing protein DprA	Machinery gene
I2436_RS04905 (GDAKBCAL_00979)	topA	1037550..1039682 (+)	2133	WP_206152592.1	type I DNA topoisomerase	-
I2436_RS04910 (GDAKBCAL_00980)	-	1039797..1040444 (+)	648	WP_021320766.1	SatD family protein	-
I2436_RS04915 (GDAKBCAL_00981)	-	1040465..1041178 (+)	714	WP_206152593.1	DUF3307 domain-containing protein	-

Sequence

Protein

• Length: 281 a.a.
• Molecular weight: 31374.30 Da
• Isoelectric Point: 8.8428

>NTDB_id=506545 I2436_RS04900 WP_012515603.1 1036604..1037449(+) (dprA) [Streptococcus equi subsp. zooepidemicus strain SEZ28]
MNNFELYKLKKAGLTNLNILNLIDYQQRNNKSLSLRDMAVVSCCKNPVLFIETYKQLNVALLKKEFNQFPSLSILDKQYP
LALREIYNPPVLLFYQGDLSLLEKPKLAVVGSRESSEIGTRSVYKIIKELKNHFVIVSGLARGIDTSAHLACLKAGGQTI
AVIGTGLDRYYPKENHQLQEFLSQRHLVLSEYGAGEAALSYHFPERNRIIAGLSRGVLVVEAKQRSGSLITCQLAMEEGR
DIFVVPDNILNGTSAGCLKLIKDGASCVTHGRDILSEYYYS

Nucleotide

• Length: 846 bp

>NTDB_id=506545 I2436_RS04900 WP_012515603.1 1036604..1037449(+) (dprA) [Streptococcus equi subsp. zooepidemicus strain SEZ28]
ATGAACAATTTTGAACTTTATAAATTAAAAAAGGCTGGGCTGACTAATTTAAATATTCTTAACCTTATTGACTACCAGCA
GCGTAATAATAAGTCTCTATCCCTTAGAGATATGGCAGTGGTTTCTTGCTGCAAAAATCCAGTTTTATTTATTGAAACCT
ACAAGCAATTAAATGTCGCCTTGTTAAAAAAGGAATTCAATCAGTTTCCGAGCTTATCTATCCTAGATAAGCAATACCCA
TTGGCTCTGAGGGAAATCTACAATCCTCCTGTTTTACTCTTTTATCAAGGTGATTTAAGCCTGTTAGAAAAACCTAAGCT
GGCAGTCGTTGGATCTAGAGAATCCAGTGAAATTGGGACGCGGTCTGTTTATAAAATCATTAAAGAGCTTAAGAATCACT
TTGTCATTGTCAGCGGGCTTGCTAGAGGTATTGATACCAGTGCTCATCTCGCTTGCTTGAAAGCAGGTGGGCAAACCATA
GCTGTTATCGGGACTGGCCTAGATCGCTACTATCCAAAGGAAAATCACCAGCTACAGGAGTTTTTATCTCAGCGTCATCT
TGTGCTCAGTGAGTATGGAGCTGGAGAGGCCGCCTTGTCTTATCATTTCCCTGAAAGAAACCGTATTATCGCAGGTCTTA
GTCGAGGTGTCCTTGTTGTTGAGGCTAAGCAGCGCTCTGGCTCTTTGATTACCTGTCAGCTAGCTATGGAAGAGGGACGT
GATATTTTTGTCGTACCTGACAATATTCTTAATGGTACATCAGCGGGCTGTTTGAAGCTGATCAAAGATGGTGCCAGCTG
TGTCACTCATGGCAGAGACATTCTTTCAGAATACTACTATTCTTAA

Domains

Predicted by InterproScan.

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (1-61)

• DNA recombination-mediator protein A (DNA_processg_A) (71-269)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Streptococcus mutans UA159	68.929	99.644	0.687
dprA/cilB/dalA	Streptococcus mitis SK321	59.286	99.644	0.591
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	58.929	99.644	0.587
dprA/cilB/dalA	Streptococcus pneumoniae D39	58.929	99.644	0.587
dprA/cilB/dalA	Streptococcus pneumoniae R6	58.929	99.644	0.587
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	58.929	99.644	0.587
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	58.571	99.644	0.584
dprA	Lactococcus lactis subsp. cremoris KW2	56.94	100	0.569
dprA	Bacillus subtilis subsp. subtilis str. 168	42.4	88.968	0.377