Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA3   Type   Regulator
Locus tag   I2435_RS01520 Genome accession   NZ_CP065059
Coordinates   293233..295209 (+) Length   658 a.a.
NCBI ID   WP_043026548.1    Uniprot ID   A0A7Z9D3Z8
Organism   Streptococcus equi subsp. zooepidemicus strain SEZ25     
Function   binding to XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 288233..300209
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I2435_RS01505 (JFMEOBDD_00302) - 288863..290044 (-) 1182 WP_043983466.1 serine hydrolase -
  I2435_RS01510 (JFMEOBDD_00303) pbp3 290128..291363 (-) 1236 WP_043983469.1 D-alanyl-D-alanine carboxypeptidase PBP3 -
  I2435_RS01515 (JFMEOBDD_00304) pbp3 291687..292925 (-) 1239 WP_206156574.1 D-alanyl-D-alanine carboxypeptidase PBP3 -
  I2435_RS01520 (JFMEOBDD_00305) amiA3 293233..295209 (+) 1977 WP_043026548.1 peptide ABC transporter substrate-binding protein Regulator
  I2435_RS01525 (JFMEOBDD_00306) amiC 295273..296772 (+) 1500 WP_014623463.1 ABC transporter permease Regulator
  I2435_RS01530 (JFMEOBDD_00307) amiD 296772..297698 (+) 927 WP_042671297.1 oligopeptide ABC transporter permease OppC Regulator
  I2435_RS01535 (JFMEOBDD_00308) amiE 297707..298777 (+) 1071 WP_012516279.1 ABC transporter ATP-binding protein Regulator
  I2435_RS01540 (JFMEOBDD_00309) amiF 298770..299693 (+) 924 WP_206156575.1 ATP-binding cassette domain-containing protein Regulator

Sequence

Protein


Download         Length: 658 a.a.        Molecular weight: 72891.26 Da        Isoelectric Point: 5.0136

>NTDB_id=506468 I2435_RS01520 WP_043026548.1 293233..295209(+) (amiA3) [Streptococcus equi subsp. zooepidemicus strain SEZ25]
MKKSKWLTTLGVAALSVSILAACGNSSSKSSESKIYSYVYSSDPSTLDYISTSKATTNDITTNAVDGLLENDQYGNLIPS
LAKDWKVSKDGLTYTYTLRDGIKWYTSDGEEYADVTAEDFVAGVKHAADVNSDALYIIQDSIKGLNDYLNGKTKDFSTVG
VKALDKKTVQYTLNQPESFWNSKLTYSVLAPVNADFLKSKGKDFGKATDPSSILYNGPFLITALTSKSSIELVKNENYWD
AKNVHLDGVQLTFYDGQDQESLFRNFDDGAYSAARLFPTTPSYKTVKKKYGDSITYGQQNATLYYAAFNLNRTSYNHTKK
TSDSQKSDTQKAILNKDFRQAMTFAFDRIAYQAQSAGEDAANKALRSTLVPPTFVQIGDKDFGDVVEEHLVTYGSQWENV
NLDDAQDGLYNPEKAKASFEKAKAALQAEGVQFPIHLDYPMDQTATVLLQQARSMKQSIEKTLGTDNVVIDIIELQRDVY
ENISYLAETPAQNDWDISTASGWGPDYVDPSSYLDIFNPTLANSQTKSIGLEPGKDLAIASAAGLDEFTKLVTEAGKITD
DLNARYTLYAKAQAALTDSAIYIPTISLGGTPRVTKIVPFSGAFAWAGTKNDFYYKYVKLQDKPVTAKQYDKALAEWKKE
KKKSNEEYNNSLEKHIEK

Nucleotide


Download         Length: 1977 bp        

>NTDB_id=506468 I2435_RS01520 WP_043026548.1 293233..295209(+) (amiA3) [Streptococcus equi subsp. zooepidemicus strain SEZ25]
ATGAAGAAAAGTAAATGGTTGACAACGCTGGGTGTCGCAGCGCTGTCGGTGTCCATCCTGGCAGCCTGTGGAAACAGCTC
AAGTAAAAGCAGTGAATCAAAGATTTATAGCTATGTCTATTCTAGTGATCCAAGTACTTTAGACTATATCAGTACAAGTA
AAGCAACAACAAATGACATAACAACAAATGCTGTTGATGGGCTTTTGGAAAATGACCAATATGGGAATTTAATCCCCTCT
CTTGCTAAGGATTGGAAGGTCTCAAAGGACGGCTTGACCTATACCTACACGCTTCGTGATGGGATCAAATGGTACACATC
TGATGGTGAAGAATATGCAGATGTGACAGCTGAGGATTTTGTGGCTGGAGTAAAGCACGCAGCAGATGTTAACTCTGATG
CCCTATATATCATTCAGGACTCTATTAAAGGCTTAAACGATTACTTGAACGGTAAGACCAAGGACTTTTCAACCGTAGGT
GTCAAAGCGCTTGACAAAAAAACGGTTCAGTACACCCTTAATCAACCAGAAAGCTTCTGGAATTCAAAGCTAACCTATAG
TGTCCTAGCTCCGGTAAATGCTGACTTCCTAAAATCAAAGGGCAAGGATTTTGGTAAGGCAACAGATCCATCATCTATTC
TGTATAATGGCCCATTTCTTATCACAGCTTTGACAAGTAAATCCTCTATCGAGCTTGTCAAAAACGAAAACTATTGGGAC
GCTAAGAATGTTCACCTTGATGGTGTTCAATTGACCTTTTACGATGGACAGGATCAGGAGTCGTTGTTTAGAAACTTTGA
TGACGGTGCTTACTCAGCGGCGAGATTATTCCCAACAACACCTTCTTACAAAACCGTTAAGAAAAAATATGGAGATAGCA
TTACTTACGGACAACAAAATGCTACTCTCTACTATGCGGCATTTAACCTAAACCGTACGTCTTACAACCATACTAAGAAG
ACCTCAGATAGCCAAAAATCAGATACCCAAAAGGCTATCTTAAACAAGGATTTCCGTCAGGCTATGACATTTGCCTTTGA
TAGAATTGCTTATCAGGCGCAATCAGCAGGTGAAGATGCAGCTAACAAAGCGCTTCGTAGCACACTTGTACCACCGACAT
TTGTGCAAATTGGCGACAAAGACTTTGGTGATGTTGTTGAGGAGCACTTGGTGACCTATGGTAGCCAGTGGGAAAATGTG
AATCTAGATGATGCACAGGATGGCTTGTACAATCCTGAAAAGGCAAAAGCATCATTTGAAAAAGCAAAAGCAGCCCTACA
AGCTGAGGGCGTACAGTTCCCAATCCATCTTGATTACCCAATGGATCAAACTGCAACGGTGCTCTTACAGCAGGCTCGCT
CTATGAAGCAGTCAATTGAGAAAACATTAGGAACTGACAATGTTGTGATTGATATTATTGAGCTTCAGAGAGATGTTTAT
GAAAATATTAGTTATCTCGCCGAAACTCCTGCTCAAAATGACTGGGATATTTCAACGGCTTCTGGCTGGGGACCTGACTA
TGTCGACCCATCATCATATCTTGATATTTTCAACCCAACGCTTGCAAACTCACAAACAAAATCAATTGGACTTGAGCCAG
GTAAGGATTTGGCCATTGCTAGTGCAGCTGGCTTAGACGAATTTACAAAGCTAGTGACAGAGGCAGGTAAGATTACTGAT
GATCTCAATGCCCGCTATACGCTCTACGCTAAGGCTCAAGCGGCATTGACAGACTCTGCTATTTACATCCCAACTATCTC
ACTTGGTGGAACACCACGTGTGACTAAAATCGTACCGTTTTCAGGTGCCTTTGCTTGGGCTGGTACTAAAAATGACTTTT
ATTACAAATACGTCAAGCTGCAAGATAAGCCTGTAACTGCTAAACAATATGACAAAGCATTAGCCGAGTGGAAAAAAGAA
AAGAAAAAATCTAACGAAGAATATAACAATTCCCTCGAGAAGCATATTGAAAAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(77-520)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7Z9D3Z8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA3 Streptococcus thermophilus LMG 18311

56.364

100

0.565
  amiA3 Streptococcus thermophilus LMD-9

56.061

100

0.562
  amiA Streptococcus salivarius strain HSISS4

55.994

100

0.561