Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   I2432_RS10195 Genome accession   NZ_CP065054
Coordinates   2147706..2148929 (+) Length   407 a.a.
NCBI ID   WP_206158851.1    Uniprot ID   -
Organism   Streptococcus equi subsp. zooepidemicus strain SEZ13     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2142706..2153929
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I2432_RS10170 (LJFMMFNO_02030) - 2143401..2145986 (+) 2586 WP_206158849.1 YfhO family protein -
  I2432_RS10190 (LJFMMFNO_02034) rlmH 2147017..2147496 (-) 480 WP_206158850.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  I2432_RS10195 (LJFMMFNO_02035) htrA 2147706..2148929 (+) 1224 WP_206158851.1 trypsin-like peptidase domain-containing protein Regulator
  I2432_RS10200 (LJFMMFNO_02036) spo0J 2149049..2149822 (+) 774 WP_111690534.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 407 a.a.        Molecular weight: 42494.11 Da        Isoelectric Point: 5.4809

>NTDB_id=506334 I2432_RS10195 WP_206158851.1 2147706..2148929(+) (htrA) [Streptococcus equi subsp. zooepidemicus strain SEZ13]
MLKSKNILKPLWVLAIGFLGGLLAALVVNGFSQNFLTSSNAKGATTTSNVSFNNTTDTTKAVKVVQDAVVSVINYQKAAS
PAISNPYINLFGEENDTSAVQKEDELSIHSEGSGVVYKKEGNTAYLVTNNHVIEGAQRIEILTADGSKIVGELVGADTYS
DLAVVKVAADKIKTIAKFADSTKINVGEVAIAIGSPLGTKYANSVTEGIVSSLSRTVTSRNEAGETISTNAIQTDAAINP
GNSGGPLINIEGQVIGINSSKISSTPTGSGGAIEGIGFAIPSSDVVTIINQLESNGAVIRPALGITMVNLSNLSTNALIQ
LNIPTSVTSGVVVASTQDGMPALGKLEQYDVITEVDGKEVSSISDLQSVLYSHEINDTIKVTFYRGTAKKKVDIKLTKTT
KDLTKKQ

Nucleotide


Download         Length: 1224 bp        

>NTDB_id=506334 I2432_RS10195 WP_206158851.1 2147706..2148929(+) (htrA) [Streptococcus equi subsp. zooepidemicus strain SEZ13]
GTGTTAAAATCAAAAAATATATTGAAGCCCTTATGGGTTTTAGCCATTGGATTTTTAGGGGGCTTATTAGCTGCCTTAGT
TGTTAATGGATTTAGTCAGAATTTTCTAACATCTTCAAATGCAAAGGGAGCAACGACAACAAGCAACGTCAGCTTTAACA
ATACAACTGATACAACAAAGGCTGTTAAGGTGGTTCAAGATGCTGTAGTGTCTGTTATTAACTATCAAAAGGCTGCTTCG
CCTGCCATTTCAAATCCTTACATCAATCTTTTCGGAGAAGAAAATGATACCTCAGCAGTACAAAAAGAGGACGAGCTAAG
CATACACAGTGAAGGCTCGGGTGTTGTCTACAAAAAAGAAGGAAATACTGCTTATCTTGTAACCAATAATCATGTCATTG
AGGGAGCTCAACGAATTGAAATTTTAACAGCAGACGGCTCTAAGATCGTTGGAGAACTAGTTGGTGCAGACACTTATTCT
GACCTAGCTGTTGTCAAAGTTGCTGCTGATAAAATCAAAACAATAGCCAAATTTGCAGATTCAACCAAAATTAATGTTGG
AGAGGTAGCCATTGCAATTGGTAGTCCTCTTGGAACAAAATATGCCAACTCAGTGACAGAAGGGATTGTTTCAAGTCTAA
GCCGTACAGTCACTTCAAGAAATGAAGCAGGTGAGACCATCTCAACAAATGCTATCCAAACTGATGCTGCTATCAATCCA
GGTAATTCAGGTGGACCACTCATCAATATTGAAGGCCAGGTTATTGGTATCAACTCAAGTAAAATATCCTCAACACCTAC
TGGCAGCGGCGGAGCCATTGAGGGAATTGGCTTTGCTATTCCATCAAGCGATGTTGTCACCATTATTAACCAACTAGAGT
CTAACGGAGCTGTTATCAGACCAGCCTTAGGCATTACAATGGTAAACTTAAGTAATCTATCAACCAATGCATTGATTCAA
TTGAATATTCCAACAAGCGTTACCAGCGGTGTTGTCGTAGCCTCTACTCAAGATGGCATGCCTGCTCTTGGTAAATTGGA
GCAGTATGATGTCATTACTGAGGTTGACGGTAAAGAAGTCAGCTCAATTAGTGACCTACAAAGTGTCTTATATAGTCATG
AGATTAACGACACCATTAAGGTAACCTTCTACAGAGGAACTGCTAAGAAGAAAGTTGACATCAAATTAACAAAAACAACT
AAGGATCTAACTAAAAAGCAGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

61.275

100

0.614

  htrA Streptococcus gordonii str. Challis substr. CH1

57

98.28

0.56

  htrA Streptococcus mitis NCTC 12261

54.408

97.543

0.531

  htrA Streptococcus pneumoniae Rx1

53.383

98.034

0.523

  htrA Streptococcus pneumoniae D39

53.383

98.034

0.523

  htrA Streptococcus pneumoniae R6

53.383

98.034

0.523

  htrA Streptococcus pneumoniae TIGR4

53.383

98.034

0.523