Detailed information NTG0498420

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: ISN36_RS19380
• Genome accession: NZ_CP063997
• Coordinates: 4526021..4527541 (-)
• Length: 506 a.a.
• NCBI ID: WP_003470343.1
• Uniprot ID: -
• Organism: Xanthomonas translucens pv. undulosa strain XtKm15
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 4521021..4532541

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ISN36_RS19360	-	4522061..4522219 (-)	159	WP_155604451.1	hypothetical protein	-
ISN36_RS19365 (ISN36_19340)	-	4522390..4523223 (+)	834	WP_058361151.1	alpha/beta hydrolase	-
ISN36_RS19370 (ISN36_19345)	-	4523626..4524714 (+)	1089	WP_230811780.1	lipocalin family protein	-
ISN36_RS19375 (ISN36_19350)	-	4524771..4525868 (+)	1098	WP_038238601.1	lipocalin-like domain-containing protein	-
ISN36_RS19380 (ISN36_19355)	comM	4526021..4527541 (-)	1521	WP_003470343.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
ISN36_RS19385 (ISN36_19360)	-	4527555..4527824 (-)	270	WP_003470344.1	accessory factor UbiK family protein	-
ISN36_RS19390 (ISN36_19365)	-	4527823..4527975 (+)	153	WP_155522278.1	hypothetical protein	-
ISN36_RS19395 (ISN36_19370)	-	4528001..4528339 (+)	339	WP_003470346.1	P-II family nitrogen regulator	-
ISN36_RS19400 (ISN36_19375)	-	4528736..4530318 (+)	1583	Protein_3850	beta-N-acetylglucosaminidase domain-containing protein	-
ISN36_RS19405 (ISN36_19380)	-	4530513..4530695 (-)	183	WP_139115874.1	hypothetical protein	-
ISN36_RS19410 (ISN36_19385)	speE	4530752..4531603 (-)	852	WP_003470348.1	polyamine aminopropyltransferase	-

Sequence

Protein

• Length: 506 a.a.
• Molecular weight: 53500.18 Da
• Isoelectric Point: 8.5177

>NTDB_id=498420 ISN36_RS19380 WP_003470343.1 4526021..4527541(-) (comM) [Xanthomonas translucens pv. undulosa strain XtKm15]
MSLALVHSRARAGVLAPPVRVEVHLSGGLPATQIVGLPEAAVRESRDRVRAAILCAQYEFPARRITVNLAPADLPKDGGR
FDLPIALGILAAAGQLDPQALGNYEFLGELALTGELRAVDGVLPAALAAAQAGRTLIVPAGNGPEAALAQHVQACTARTL
LEVCALLNGSKTLPAAEALPAAATPFPDLSDVRGQAQARRALEIAAAGHHHLLLIGSPGCGKTLLASRLPGILPEASEAE
ALEAAAIASVSGRGLDPARWRQRPYRSPHHTASAVSLVGGGTHPRPGEISLAHRGVLFLDELPEWNRHALEVLREPLESG
TVTVSRAARSAEFPARFQLVAAMNPCPCGWAGDASGRCRCSDDSIRRYRARISGPLLDRIDLHVDVPRLPPQALRADAAP
GESSAAVRVRVEQARQRQLARAGCPNGQLGHSETLRDCRLQPRDEALLEHAIDRLRLSARSLHRILRVARTIADLAGSDA
IATAHLTEAIGYRHLDRGEAPLARSA

Nucleotide

• Length: 1521 bp

>NTDB_id=498420 ISN36_RS19380 WP_003470343.1 4526021..4527541(-) (comM) [Xanthomonas translucens pv. undulosa strain XtKm15]
ATGAGCCTGGCGCTGGTGCACAGCCGTGCCCGCGCGGGGGTGCTTGCGCCTCCGGTTCGGGTCGAGGTCCATCTGTCCGG
CGGACTGCCGGCCACGCAGATCGTCGGCCTGCCAGAAGCGGCGGTGCGCGAATCGCGCGACCGGGTACGCGCCGCCATCC
TGTGCGCGCAATACGAATTCCCGGCGCGGCGCATCACCGTCAATCTGGCACCGGCCGACCTGCCCAAGGACGGCGGCCGC
TTCGACCTGCCAATCGCGCTGGGCATCCTCGCCGCCGCAGGGCAACTCGACCCGCAGGCGCTGGGCAACTACGAATTCCT
CGGCGAACTGGCCTTGACCGGCGAACTGCGCGCCGTGGACGGGGTGCTGCCGGCGGCGCTGGCCGCCGCCCAAGCAGGAC
GCACGCTGATCGTGCCCGCCGGCAACGGCCCCGAAGCGGCGCTGGCGCAGCACGTGCAGGCGTGCACTGCGCGCACCCTG
CTAGAAGTCTGCGCGCTGTTGAACGGCAGCAAGACTCTGCCCGCCGCCGAAGCCCTGCCGGCCGCGGCCACACCGTTTCC
CGACCTGAGCGACGTGCGCGGGCAGGCCCAGGCGCGGCGCGCATTGGAGATCGCGGCGGCCGGTCATCACCATCTGTTGT
TGATCGGCAGCCCGGGCTGCGGCAAGACCCTGCTGGCCTCGCGCCTGCCCGGCATCCTGCCCGAGGCCAGCGAGGCCGAG
GCGCTGGAAGCGGCGGCGATCGCCTCGGTCAGCGGCCGCGGCCTGGACCCGGCGCGCTGGCGGCAACGCCCCTACCGATC
CCCGCACCACACCGCCAGCGCGGTGTCGCTGGTCGGCGGCGGTACCCATCCGCGCCCCGGCGAAATCTCGCTGGCGCATC
GCGGCGTGTTGTTCCTCGACGAGTTGCCCGAATGGAACCGGCACGCCCTGGAAGTGCTGCGCGAGCCGCTGGAATCGGGC
ACGGTCACCGTCTCGCGCGCAGCACGCAGCGCCGAATTCCCGGCCCGCTTCCAGCTGGTCGCGGCGATGAACCCCTGCCC
CTGCGGCTGGGCCGGCGATGCCAGCGGCCGTTGCCGCTGCAGCGACGACAGCATCCGCCGCTATCGCGCGCGCATCTCCG
GCCCGTTGCTGGACCGCATCGACCTGCATGTGGACGTACCGCGCCTGCCGCCGCAGGCATTGCGCGCCGATGCCGCTCCC
GGCGAAAGCAGCGCCGCCGTACGCGTGCGGGTGGAGCAGGCGCGGCAACGCCAGCTGGCGCGCGCCGGCTGCCCCAACGG
CCAGCTCGGCCACAGCGAAACCCTGCGCGACTGCCGCCTGCAGCCGCGCGACGAAGCGCTGCTGGAACACGCCATCGACC
GCCTGCGCCTGTCGGCGCGCTCGCTGCACCGCATCCTGCGCGTGGCCCGCACCATTGCCGACCTGGCCGGCAGCGACGCG
ATCGCCACCGCGCACCTGACCGAGGCGATCGGTTACCGGCACCTGGACCGCGGCGAGGCACCATTGGCGCGCAGCGCCTG
A

Domains

Predicted by InterproScan.

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (188-392)

• Subunit ChlI of Mg-chelatase (ChlI) (21-142)

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (401-493)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Vibrio cholerae strain A1552	56.313	98.617	0.555
comM	Vibrio campbellii strain DS40M4	54.781	99.209	0.543
comM	Haemophilus influenzae Rd KW20	54.167	99.605	0.54
comM	Glaesserella parasuis strain SC1401	53.373	99.605	0.532
comM	Legionella pneumophila str. Paris	50.198	99.605	0.5
comM	Legionella pneumophila strain ERS1305867	50.198	99.605	0.5
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	44.576	100	0.447