Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | IOD65_RS02560 | Genome accession | NZ_CP063769 |
| Coordinates | 541919..542347 (+) | Length | 142 a.a. |
| NCBI ID | WP_005067107.1 | Uniprot ID | A0A022J8X9 |
| Organism | Acinetobacter sp. Ac-14 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 536919..547347
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IOD65_RS02540 (IOD65_02540) | - | 538300..539187 (+) | 888 | WP_005067102.1 | metal-dependent hydrolase | - |
| IOD65_RS02545 (IOD65_02545) | - | 539318..539908 (+) | 591 | WP_002117090.1 | LemA family protein | - |
| IOD65_RS02550 (IOD65_02550) | - | 539933..541015 (+) | 1083 | WP_005067103.1 | TPM domain-containing protein | - |
| IOD65_RS02555 (IOD65_02555) | - | 541009..541569 (+) | 561 | WP_194156772.1 | TPM domain-containing protein | - |
| IOD65_RS02560 (IOD65_02560) | pilA | 541919..542347 (+) | 429 | WP_005067107.1 | pilin | Machinery gene |
| IOD65_RS02565 (IOD65_02565) | - | 542403..543716 (+) | 1314 | WP_005067109.1 | O-antigen ligase family protein | - |
| IOD65_RS02570 (IOD65_02570) | - | 543822..545450 (+) | 1629 | WP_005067111.1 | PglL family O-oligosaccharyltransferase | - |
| IOD65_RS02575 (IOD65_02575) | bfr | 545493..545957 (-) | 465 | WP_005067113.1 | heteropolymeric bacterioferritin subunit Bfr | - |
| IOD65_RS02580 (IOD65_02580) | - | 546201..546395 (-) | 195 | WP_000289091.1 | bacterioferritin-associated ferredoxin | - |
| IOD65_RS02585 (IOD65_02585) | - | 546498..546625 (+) | 128 | Protein_497 | hypothetical protein | - |
| IOD65_RS02590 (IOD65_02590) | - | 546615..546998 (-) | 384 | WP_002116996.1 | RidA family protein | - |
Sequence
Protein
Download Length: 142 a.a. Molecular weight: 14486.60 Da Isoelectric Point: 7.7776
>NTDB_id=496649 IOD65_RS02560 WP_005067107.1 541919..542347(+) (pilA) [Acinetobacter sp. Ac-14]
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQNYIAKSQASEAFTLADGLKTTINTNLQAGTCFAGGAAAVTAADKVAGKY
GEAVIGGSAPSCTITYTFKSSGVSNKLTSKKIGMNVSETGILTKNSDTDTPAELLPQSFTAS
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQNYIAKSQASEAFTLADGLKTTINTNLQAGTCFAGGAAAVTAADKVAGKY
GEAVIGGSAPSCTITYTFKSSGVSNKLTSKKIGMNVSETGILTKNSDTDTPAELLPQSFTAS
Nucleotide
Download Length: 429 bp
>NTDB_id=496649 IOD65_RS02560 WP_005067107.1 541919..542347(+) (pilA) [Acinetobacter sp. Ac-14]
ATGAATGCACAAAAAGGTTTTACATTAATTGAACTCATGATCGTAGTTGCCATTATTGGTATTTTGGCAGCAATCGCGAT
TCCTGCTTATCAAAACTACATTGCTAAGTCGCAAGCATCTGAAGCGTTTACATTGGCAGATGGATTGAAAACAACAATTA
ATACTAATTTACAAGCTGGCACATGTTTTGCCGGTGGGGCTGCTGCAGTAACTGCAGCTGATAAAGTGGCTGGAAAATAT
GGGGAAGCAGTGATTGGTGGTTCAGCTCCAAGTTGTACAATTACCTACACATTTAAATCTTCAGGTGTATCAAATAAGCT
TACATCTAAAAAGATTGGCATGAATGTAAGTGAAACAGGTATCCTGACAAAGAATAGTGATACGGATACACCAGCTGAGT
TACTTCCACAATCTTTTACAGCTTCATAA
ATGAATGCACAAAAAGGTTTTACATTAATTGAACTCATGATCGTAGTTGCCATTATTGGTATTTTGGCAGCAATCGCGAT
TCCTGCTTATCAAAACTACATTGCTAAGTCGCAAGCATCTGAAGCGTTTACATTGGCAGATGGATTGAAAACAACAATTA
ATACTAATTTACAAGCTGGCACATGTTTTGCCGGTGGGGCTGCTGCAGTAACTGCAGCTGATAAAGTGGCTGGAAAATAT
GGGGAAGCAGTGATTGGTGGTTCAGCTCCAAGTTGTACAATTACCTACACATTTAAATCTTCAGGTGTATCAAATAAGCT
TACATCTAAAAAGATTGGCATGAATGTAAGTGAAACAGGTATCCTGACAAAGAATAGTGATACGGATACACCAGCTGAGT
TACTTCCACAATCTTTTACAGCTTCATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Acinetobacter nosocomialis M2 |
92.254 |
100 |
0.923 |
| pilA | Acinetobacter baumannii strain A118 |
40 |
100 |
0.437 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
41.781 |
100 |
0.43 |
| pilA | Vibrio cholerae strain A1552 |
41.781 |
100 |
0.43 |
| pilA | Vibrio cholerae C6706 |
41.781 |
100 |
0.43 |