Detailed information NTG0496158

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: INQ42_RS12130
• Genome accession: NZ_CP063657
• Coordinates: 2705756..2707270 (+)
• Length: 504 a.a.
• NCBI ID: WP_194034488.1
• Uniprot ID: -
• Organism: Novilysobacter avium strain H23M41
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2700756..2712270

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
INQ42_RS12110 (INQ42_12110)	speE	2702147..2702998 (+)	852	WP_194034485.1	polyamine aminopropyltransferase	-
INQ42_RS12115 (INQ42_12115)	-	2703005..2704909 (-)	1905	WP_194034486.1	DUF4153 domain-containing protein	-
INQ42_RS12120 (INQ42_12120)	-	2704932..2705270 (-)	339	WP_043958974.1	P-II family nitrogen regulator	-
INQ42_RS12125 (INQ42_12125)	-	2705447..2705746 (+)	300	WP_194034487.1	ubiquinone biosynthesis accessory factor UbiK	-
INQ42_RS12130 (INQ42_12130)	comM	2705756..2707270 (+)	1515	WP_194034488.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
INQ42_RS12135 (INQ42_12135)	-	2707325..2707537 (-)	213	WP_194034489.1	DUF2945 domain-containing protein	-
INQ42_RS12140 (INQ42_12140)	aceA	2707665..2708960 (-)	1296	WP_194034490.1	isocitrate lyase	-
INQ42_RS12145 (INQ42_12145)	aceB	2709015..2710697 (-)	1683	WP_194034491.1	malate synthase A	-
INQ42_RS12150 (INQ42_12150)	-	2710843..2711814 (+)	972	WP_194034492.1	LysR family transcriptional regulator	-

Sequence

Protein

• Length: 504 a.a.
• Molecular weight: 53198.13 Da
• Isoelectric Point: 8.5229

>NTDB_id=496158 INQ42_RS12130 WP_194034488.1 2705756..2707270(+) (comM) [Novilysobacter avium strain H23M41]
MNLALVHSRARSGIRAAPVRVEVHLGGGLPSMSIVGLPETAVRESRERVRAAIQCAQFEFPARRITVNLAPADLPKGGGR
FDLPIALGILAASGQIPLEALGEYEFLGELGLTGELRAVDAVLPAALAAAQAGRKLVVPPANGAEAALVSGVETRTARTL
LEVCAMLSGHKSLPRAEAPAPSPRLGPDLADVRGQAHARRALEVAAAGGHHLLLVGPPGCGKTLLASRLPGLLPVASDAE
ALDSAAVASLGGRGVDASLWRERPFRSPHHTASAVALVGGGAEPRPGEISMAHNGVLFLDELPEWSRRTLEVLREPLESG
TVTISRAARSVEFPARFQLVAAMNPCPCGWAGDPSGRCRCSPDMVVNYRARISGPLMDRIDLHVEVPRLPPSELRPDAAP
AENSDTVRERVVAARKLQLERAGKANAHLSQSETGATCRLAEADFALLERAIDTLHLSARSMHRIMRVARTVADLAGSPQ
IQTIHLSEAIGYRRVDRGFPVATA

Nucleotide

• Length: 1515 bp

>NTDB_id=496158 INQ42_RS12130 WP_194034488.1 2705756..2707270(+) (comM) [Novilysobacter avium strain H23M41]
ATGAACCTGGCACTCGTGCACAGCCGTGCGCGATCGGGCATCCGTGCCGCCCCGGTCCGCGTGGAGGTGCATCTTGGCGG
CGGCCTGCCCTCGATGTCGATCGTCGGCCTTCCGGAAACCGCGGTGCGCGAATCGCGTGAGCGCGTGCGCGCCGCGATCC
AGTGCGCCCAGTTCGAATTCCCGGCCCGGCGGATCACCGTCAACCTCGCCCCCGCCGACCTGCCCAAGGGCGGCGGCCGC
TTCGACCTGCCGATCGCGCTGGGAATCCTCGCCGCCAGTGGGCAGATCCCGCTGGAGGCCCTGGGTGAATACGAGTTCCT
CGGCGAGCTGGGCCTGACCGGCGAGTTGCGCGCGGTGGACGCGGTGCTGCCGGCCGCGCTGGCCGCGGCCCAGGCCGGCC
GCAAACTGGTCGTGCCACCCGCCAACGGAGCCGAAGCCGCACTGGTCAGCGGGGTGGAGACGCGGACCGCGCGCACGCTG
CTGGAAGTGTGCGCGATGTTGTCAGGGCATAAATCGCTGCCACGGGCCGAAGCTCCAGCCCCGAGTCCGCGCCTCGGACC
GGACCTGGCCGACGTGCGCGGCCAGGCGCATGCGCGCCGCGCGCTTGAGGTGGCCGCGGCCGGTGGTCACCACCTGCTAC
TCGTGGGGCCCCCAGGCTGTGGAAAGACACTCCTGGCATCCCGCTTGCCGGGTTTGCTGCCGGTGGCCAGCGATGCCGAA
GCGCTGGATTCGGCGGCCGTCGCTTCGCTGGGCGGACGTGGCGTGGACGCGTCGCTGTGGCGGGAACGCCCGTTCCGCTC
CCCGCACCACACGGCCAGTGCGGTCGCGCTGGTCGGCGGTGGCGCCGAGCCGCGACCGGGCGAAATTTCCATGGCGCACA
ACGGCGTACTGTTTCTGGACGAGCTGCCCGAATGGAGCCGGCGCACGCTGGAGGTGCTGCGCGAGCCGCTGGAGTCGGGC
ACCGTCACCATCTCGCGCGCCGCCCGCAGCGTCGAGTTCCCGGCGCGCTTCCAGCTGGTGGCGGCCATGAACCCCTGCCC
CTGTGGCTGGGCCGGCGACCCCAGCGGGCGCTGCCGCTGCAGCCCCGACATGGTCGTGAATTACCGCGCGCGCATTTCCG
GGCCGCTGATGGACCGGATCGACCTGCACGTCGAGGTGCCGCGGCTGCCGCCATCGGAGCTGCGACCGGATGCCGCGCCT
GCCGAGAACAGCGATACCGTCCGCGAGCGGGTGGTCGCCGCCCGCAAGCTGCAGCTGGAGCGTGCGGGCAAGGCCAACGC
CCACCTCAGTCAGTCAGAGACCGGTGCGACCTGCCGCTTGGCCGAGGCCGACTTCGCCCTGCTGGAACGCGCGATCGACA
CCCTGCACCTGTCGGCACGCTCGATGCACCGGATCATGCGGGTGGCGCGGACGGTCGCCGACCTAGCCGGCAGTCCGCAG
ATCCAGACCATCCACCTGAGCGAGGCGATCGGTTATCGGCGAGTGGATCGCGGGTTCCCGGTGGCAACGGCCTGA

Domains

Predicted by InterproScan.

• Subunit ChlI of Mg-chelatase (ChlI) (21-142)

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (188-392)

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (402-493)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Vibrio campbellii strain DS40M4	54.545	100	0.548
comM	Vibrio cholerae strain A1552	54.709	99.008	0.542
comM	Glaesserella parasuis strain SC1401	52.976	100	0.53
comM	Haemophilus influenzae Rd KW20	52.778	100	0.528
comM	Legionella pneumophila str. Paris	50.602	98.81	0.5
comM	Legionella pneumophila strain ERS1305867	50.602	98.81	0.5
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	44.597	100	0.45