Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | SSAL_RS00755 | Genome accession | NC_017594 |
| Coordinates | 139250..140206 (+) | Length | 318 a.a. |
| NCBI ID | WP_014632544.1 | Uniprot ID | - |
| Organism | Streptococcus salivarius 57.I | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 134250..145206
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SSAL_RS00715 (Ssal_00141) | - | 135149..135511 (+) | 363 | WP_002887019.1 | DUF1033 family protein | - |
| SSAL_RS00720 (Ssal_00142) | comGA/cglA/cilD | 135590..136531 (+) | 942 | WP_002887018.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| SSAL_RS00725 (Ssal_00143) | comYB | 136413..137513 (+) | 1101 | WP_118172207.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| SSAL_RS00730 (Ssal_00144) | comYC | 137522..137836 (+) | 315 | WP_037611125.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| SSAL_RS00735 (Ssal_00145) | comYD | 137796..138224 (+) | 429 | WP_014632541.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| SSAL_RS00740 (Ssal_00146) | comGE | 138256..138486 (+) | 231 | WP_013991265.1 | competence type IV pilus minor pilin ComGE | - |
| SSAL_RS00745 (Ssal_00147) | comYF | 138473..138910 (+) | 438 | WP_014632542.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| SSAL_RS00750 | comGG | 138888..139205 (+) | 318 | WP_045001363.1 | competence type IV pilus minor pilin ComGG | - |
| SSAL_RS00755 (Ssal_00149) | comYH | 139250..140206 (+) | 957 | WP_014632544.1 | class I SAM-dependent methyltransferase | Machinery gene |
| SSAL_RS00760 (Ssal_00150) | - | 140263..141456 (+) | 1194 | WP_045001366.1 | acetate kinase | - |
| SSAL_RS00765 (Ssal_00151) | - | 141707..141904 (+) | 198 | WP_002885716.1 | helix-turn-helix transcriptional regulator | - |
| SSAL_RS00770 (Ssal_00152) | - | 141916..142572 (+) | 657 | WP_014632546.1 | type II CAAX endopeptidase family protein | - |
| SSAL_RS00775 (Ssal_00153) | - | 142650..143096 (+) | 447 | WP_045001368.1 | hypothetical protein | - |
| SSAL_RS00780 (Ssal_00154) | - | 143209..143871 (+) | 663 | WP_014632548.1 | type II CAAX endopeptidase family protein | - |
| SSAL_RS00785 (Ssal_00155) | proC | 143898..144668 (-) | 771 | WP_014632549.1 | pyrroline-5-carboxylate reductase | - |
Sequence
Protein
Download Length: 318 a.a. Molecular weight: 35773.65 Da Isoelectric Point: 4.3805
>NTDB_id=49378 SSAL_RS00755 WP_014632544.1 139250..140206(+) (comYH) [Streptococcus salivarius 57.I]
MNFEAIETAFELLLENVQTIENDLGTHAYDALIEQNSYYLGAEVANEVIIKNNEKLRALNLSKEEWRRAFQFLFIKLGQL
EALQANHQFTPDAIGFIILYLLEGLTKDDQLDVLEIGSGTGNLAETLLNNSQKNLNYMGMEVDDLLIDLSASIADVVNSS
AVYIQEDAVRPHILKESDVIISDLPVGYYPNDEIASRFKVAATGEHTYAHHLLMEQSLKYLKKDGIAILLAPTNLLTSPQ
SDLLKKWLSGYADIIAVITLPEAAFGNKHNMKSIFVLKKQTENAPETFVYPLSDLQNPEVLKDFTENFQKWKSDNSIF
MNFEAIETAFELLLENVQTIENDLGTHAYDALIEQNSYYLGAEVANEVIIKNNEKLRALNLSKEEWRRAFQFLFIKLGQL
EALQANHQFTPDAIGFIILYLLEGLTKDDQLDVLEIGSGTGNLAETLLNNSQKNLNYMGMEVDDLLIDLSASIADVVNSS
AVYIQEDAVRPHILKESDVIISDLPVGYYPNDEIASRFKVAATGEHTYAHHLLMEQSLKYLKKDGIAILLAPTNLLTSPQ
SDLLKKWLSGYADIIAVITLPEAAFGNKHNMKSIFVLKKQTENAPETFVYPLSDLQNPEVLKDFTENFQKWKSDNSIF
Nucleotide
Download Length: 957 bp
>NTDB_id=49378 SSAL_RS00755 WP_014632544.1 139250..140206(+) (comYH) [Streptococcus salivarius 57.I]
ATGAATTTTGAAGCAATTGAGACAGCCTTTGAGCTGTTGTTAGAAAATGTCCAAACCATTGAAAATGATCTTGGAACCCA
TGCTTACGATGCCCTTATTGAGCAAAATTCCTATTATTTGGGGGCTGAGGTAGCTAATGAAGTCATCATCAAAAACAACG
AGAAATTACGTGCCCTTAATCTAAGCAAAGAGGAGTGGCGTCGTGCTTTTCAGTTCTTGTTTATCAAGCTAGGGCAATTG
GAAGCCTTACAAGCCAATCACCAATTTACACCTGATGCTATTGGATTTATCATTCTTTACCTACTTGAAGGTTTGACCAA
GGACGACCAATTAGATGTTTTGGAGATTGGTTCGGGGACAGGAAACTTGGCTGAAACTCTTCTAAATAATAGTCAGAAAA
ACCTTAATTATATGGGAATGGAAGTTGACGATCTCCTTATCGATTTGTCAGCTAGTATTGCTGATGTGGTGAATTCGAGT
GCAGTTTACATCCAAGAAGATGCTGTTCGACCACATATTCTCAAAGAGAGTGATGTTATTATCAGTGACCTACCTGTTGG
TTACTACCCTAATGATGAGATTGCGAGTCGTTTCAAGGTTGCAGCAACTGGTGAACACACCTATGCCCATCACCTTCTCA
TGGAGCAATCACTCAAGTACTTGAAGAAAGATGGTATTGCTATTCTTTTGGCACCAACTAATCTTTTGACAAGCCCACAA
AGTGATTTGCTTAAGAAATGGCTATCAGGCTATGCTGATATTATTGCCGTTATCACTCTTCCAGAAGCAGCTTTTGGCAA
TAAACATAATATGAAGTCTATCTTTGTGCTTAAAAAACAAACTGAAAATGCTCCTGAGACCTTCGTTTATCCACTTAGTG
ATTTGCAAAACCCAGAGGTCCTCAAAGATTTTACAGAGAATTTCCAAAAATGGAAATCAGATAATTCCATTTTCTAG
ATGAATTTTGAAGCAATTGAGACAGCCTTTGAGCTGTTGTTAGAAAATGTCCAAACCATTGAAAATGATCTTGGAACCCA
TGCTTACGATGCCCTTATTGAGCAAAATTCCTATTATTTGGGGGCTGAGGTAGCTAATGAAGTCATCATCAAAAACAACG
AGAAATTACGTGCCCTTAATCTAAGCAAAGAGGAGTGGCGTCGTGCTTTTCAGTTCTTGTTTATCAAGCTAGGGCAATTG
GAAGCCTTACAAGCCAATCACCAATTTACACCTGATGCTATTGGATTTATCATTCTTTACCTACTTGAAGGTTTGACCAA
GGACGACCAATTAGATGTTTTGGAGATTGGTTCGGGGACAGGAAACTTGGCTGAAACTCTTCTAAATAATAGTCAGAAAA
ACCTTAATTATATGGGAATGGAAGTTGACGATCTCCTTATCGATTTGTCAGCTAGTATTGCTGATGTGGTGAATTCGAGT
GCAGTTTACATCCAAGAAGATGCTGTTCGACCACATATTCTCAAAGAGAGTGATGTTATTATCAGTGACCTACCTGTTGG
TTACTACCCTAATGATGAGATTGCGAGTCGTTTCAAGGTTGCAGCAACTGGTGAACACACCTATGCCCATCACCTTCTCA
TGGAGCAATCACTCAAGTACTTGAAGAAAGATGGTATTGCTATTCTTTTGGCACCAACTAATCTTTTGACAAGCCCACAA
AGTGATTTGCTTAAGAAATGGCTATCAGGCTATGCTGATATTATTGCCGTTATCACTCTTCCAGAAGCAGCTTTTGGCAA
TAAACATAATATGAAGTCTATCTTTGTGCTTAAAAAACAAACTGAAAATGCTCCTGAGACCTTCGTTTATCCACTTAGTG
ATTTGCAAAACCCAGAGGTCCTCAAAGATTTTACAGAGAATTTCCAAAAATGGAAATCAGATAATTCCATTTTCTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA159 |
70.476 |
99.057 |
0.698 |
| comYH | Streptococcus mutans UA140 |
70.476 |
99.057 |
0.698 |