Detailed information NTG0493220

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: INP89_RS04500
• Genome accession: NZ_CP063127
• Coordinates: 901943..903472 (+)
• Length: 509 a.a.
• NCBI ID: WP_005693440.1
• Uniprot ID: -
• Organism: Haemophilus influenzae strain M1C112_1
• Function: require for natural transformation (predicted from homology) Unclear

Genomic Context

Location: 896943..908472

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
INP89_RS04475 (INP89_04470)	oppC	897289..898224 (+)	936	WP_005651799.1	oligopeptide ABC transporter permease OppC	-
INP89_RS04480 (INP89_04475)	-	898234..899205 (+)	972	WP_005647625.1	ABC transporter ATP-binding protein	-
INP89_RS04485 (INP89_04480)	oppF	899202..900200 (+)	999	WP_005657282.1	murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF	-
INP89_RS04490 (INP89_04485)	-	900240..901106 (-)	867	WP_005670794.1	VirK/YbjX family protein	-
INP89_RS04495 (INP89_04490)	yihA	901211..901828 (+)	618	WP_005651790.1	ribosome biogenesis GTP-binding protein YihA/YsxC	-
INP89_RS04500 (INP89_04495)	comM	901943..903472 (+)	1530	WP_005693440.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
INP89_RS04505 (INP89_04500)	deoC	903506..904177 (-)	672	WP_071163203.1	deoxyribose-phosphate aldolase	-
INP89_RS04510 (INP89_04505)	-	904288..904791 (+)	504	WP_005651783.1	protein disulfide oxidoreductase	-
INP89_RS04515 (INP89_04510)	rfaD	904844..905770 (+)	927	WP_012055407.1	ADP-glyceromanno-heptose 6-epimerase	-
INP89_RS04520 (INP89_04515)	xylB	905821..907299 (-)	1479	WP_012055406.1	xylulokinase	-

Sequence

Protein

• Length: 509 a.a.
• Molecular weight: 55871.35 Da
• Isoelectric Point: 9.7683

>NTDB_id=493220 INP89_RS04500 WP_005693440.1 901943..903472(+) (comM) [Haemophilus influenzae strain M1C112_1]
MSLAIVYSRASMGVQAPLVTIEVHLSNGKPGFTLVGLPEKTVKEAQDRVRSALMNAQFKYPAKRITVNLAPADLPKEGGR
FDLPIAIGILAASDQLDASHLKQFEFVAELALTGQLRGVHGVIPAILAAQKSKRELIIAKQNANEASLVSDQNTYFAQTL
LDVVQFLNGQEKLPLATEIVKESAVNFSGKNTLDLTDIIGQQHAKRALTIAAAGQHNLLFLGPPGTGKTMLASRLTGLLP
EMTDLEAIETASVTSLVQNELNFHNWKQRPFRAPHHSASMPALVGGGTIPKPGEISLATNGVLFLDELPEFERKVLDALR
QPLESGEIIISRANAKIQFPARFQLVAAMNPSPTGHYTGTHNRTSPQQIMRYLNRLSGPFLDRFDLSIEVPLLPQGSLQN
TGDRGETSAQVREKVLKVREIQMERAGKINAYLNSKEIERDCKLNDKDAFFLEKALNKLGLSVRAYHRILKVSRTIADLQ
GEQQISQPHLAEALGYRAMDRLLQKLSNM

Nucleotide

• Length: 1530 bp

>NTDB_id=493220 INP89_RS04500 WP_005693440.1 901943..903472(+) (comM) [Haemophilus influenzae strain M1C112_1]
ATGTCCCTTGCTATTGTTTACAGCCGTGCCTCTATGGGCGTGCAAGCGCCGCTAGTCACCATTGAGGTGCATTTAAGCAA
CGGAAAACCAGGATTTACACTTGTTGGTTTGCCAGAAAAAACCGTGAAAGAGGCACAAGATAGGGTGCGTAGTGCGTTGA
TGAATGCACAATTTAAATACCCAGCCAAGCGTATCACTGTAAATCTTGCACCTGCGGATTTACCGAAAGAAGGCGGAAGA
TTTGATTTGCCTATCGCCATCGGAATTTTAGCCGCATCAGATCAGCTTGATGCGAGCCACTTAAAGCAATTTGAATTTGT
GGCAGAGCTTGCGCTGACGGGCCAATTGCGTGGCGTACATGGTGTGATTCCCGCTATTCTTGCAGCTCAAAAGTCAAAGC
GAGAGTTAATTATCGCGAAACAAAATGCTAATGAAGCCTCGCTCGTGTCTGATCAAAATACTTATTTTGCTCAAACGCTT
TTAGATGTGGTGCAATTTCTCAATGGTCAGGAAAAATTACCCCTCGCCACTGAAATTGTGAAAGAAAGTGCGGTAAATTT
TTCAGGTAAAAATACGTTAGATTTAACGGATATTATCGGACAACAGCACGCTAAACGAGCATTGACCATTGCCGCAGCGG
GGCAGCATAATTTGCTCTTTCTTGGCCCACCGGGTACAGGGAAAACCATGTTAGCCAGCCGTTTGACAGGGCTTTTGCCT
GAGATGACAGATTTAGAAGCGATAGAAACAGCATCTGTAACGAGTTTAGTTCAAAACGAGTTAAATTTTCATAATTGGAA
GCAACGTCCTTTTCGCGCACCGCACCATAGTGCATCAATGCCGGCTTTAGTTGGTGGTGGGACGATCCCTAAACCTGGTG
AAATATCCTTAGCAACAAATGGCGTACTTTTTCTTGATGAACTTCCAGAATTTGAGCGAAAAGTGTTAGATGCACTACGT
CAGCCTTTGGAAAGTGGTGAGATTATTATTTCTCGTGCTAATGCCAAAATTCAATTTCCGGCTCGTTTTCAATTAGTGGC
AGCGATGAATCCAAGCCCTACAGGCCATTATACTGGGACACATAACCGCACTTCACCACAGCAAATTATGCGTTATTTGA
ATCGACTTTCAGGGCCATTTTTAGATCGTTTTGATTTATCTATTGAAGTGCCTTTACTGCCACAAGGTAGCTTGCAAAAT
ACGGGCGATCGTGGCGAAACCAGCGCGCAAGTTCGTGAAAAAGTGTTAAAAGTACGTGAGATTCAAATGGAAAGAGCAGG
GAAAATTAACGCTTATTTGAACAGTAAAGAGATTGAGCGTGATTGCAAGTTAAATGATAAAGATGCCTTTTTCCTTGAAA
AAGCACTGAATAAACTGGGGCTTTCTGTTCGGGCTTATCATCGTATTTTGAAAGTTTCTCGAACCATTGCCGATCTACAA
GGAGAACAACAAATTTCTCAACCGCACTTGGCGGAGGCCTTGGGCTATCGAGCAATGGATCGTTTGCTGCAGAAATTGTC
GAATATGTAA

Domains

Predicted by InterproScan.

• Subunit ChlI of Mg-chelatase (ChlI) (21-142)

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (194-395)

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (405-497)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Haemophilus influenzae Rd KW20	99.607	100	0.996
comM	Glaesserella parasuis strain SC1401	79.093	99.607	0.788
comM	Vibrio cholerae strain A1552	67.456	99.607	0.672
comM	Vibrio campbellii strain DS40M4	66.075	99.607	0.658
comM	Legionella pneumophila str. Paris	51.093	98.821	0.505
comM	Legionella pneumophila strain ERS1305867	51.093	98.821	0.505
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	46.99	100	0.475