Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | M062_RS30195 | Genome accession | NC_021577 |
| Coordinates | 5135448..5135987 (-) | Length | 179 a.a. |
| NCBI ID | WP_003116248.1 | Uniprot ID | Q59651 |
| Organism | Pseudomonas aeruginosa RP73 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 5130448..5140987
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M062_RS23750 (M062_23800) | - | 5131132..5133387 (-) | 2256 | WP_016562337.1 | DUF1631 domain-containing protein | - |
| M062_RS23755 (M062_23805) | nadC | 5133673..5134521 (+) | 849 | WP_016562338.1 | carboxylating nicotinate-nucleotide diphosphorylase | - |
| M062_RS23765 (M062_23815) | - | 5134686..5135384 (-) | 699 | WP_023122772.1 | hypothetical protein | - |
| M062_RS30195 | pilE | 5135448..5135987 (-) | 540 | WP_003116248.1 | pilin | Machinery gene |
| M062_RS23775 (M062_23820) | pilB | 5136216..5137919 (+) | 1704 | WP_003116249.1 | type IV-A pilus assembly ATPase PilB | Machinery gene |
| M062_RS23780 (M062_23825) | pilC | 5137923..5139140 (+) | 1218 | WP_003116250.1 | type II secretion system F family protein | Machinery gene |
| M062_RS23785 (M062_23830) | pilD | 5139143..5140015 (+) | 873 | WP_016562340.1 | type IV prepilin peptidase/methyltransferase PilD | Machinery gene |
| M062_RS23790 (M062_23835) | coaE | 5140012..5140623 (+) | 612 | WP_003094654.1 | dephospho-CoA kinase | - |
| M062_RS23795 (M062_23840) | yacG | 5140620..5140820 (+) | 201 | WP_003094656.1 | DNA gyrase inhibitor YacG | - |
Sequence
Protein
Download Length: 179 a.a. Molecular weight: 18003.27 Da Isoelectric Point: 4.6894
>NTDB_id=49320 M062_RS30195 WP_003116248.1 5135448..5135987(-) (pilE) [Pseudomonas aeruginosa RP73]
MTAQKGFTLIELMIVVAIIGILAAVALPAYQDYTIRARVTEGVGLAASAKTLIGDSSATAGELAASARVWNAQAGNAGAT
SKYVTSVQIAEATGEITVTFNAANVGNIPANSTLVFTPYVQNAAGAPTQLGASYASGVTGSIDWGCASDSNAVSSGTDRN
MPALTAGTLPARFAPSECR
MTAQKGFTLIELMIVVAIIGILAAVALPAYQDYTIRARVTEGVGLAASAKTLIGDSSATAGELAASARVWNAQAGNAGAT
SKYVTSVQIAEATGEITVTFNAANVGNIPANSTLVFTPYVQNAAGAPTQLGASYASGVTGSIDWGCASDSNAVSSGTDRN
MPALTAGTLPARFAPSECR
Nucleotide
Download Length: 540 bp
>NTDB_id=49320 M062_RS30195 WP_003116248.1 5135448..5135987(-) (pilE) [Pseudomonas aeruginosa RP73]
ATGACAGCTCAGAAAGGCTTTACCTTGATCGAACTGATGATCGTGGTTGCGATCATCGGTATTCTTGCTGCCGTCGCTTT
GCCGGCATATCAGGATTACACCATTCGTGCTCGCGTGACAGAGGGGGTTGGCTTGGCTGCCAGCGCCAAGACGCTTATTG
GCGATAGCTCTGCCACTGCCGGTGAGCTAGCCGCTTCGGCAAGGGTCTGGAATGCTCAAGCCGGTAACGCCGGTGCTACC
AGTAAGTATGTGACCTCTGTACAAATTGCAGAGGCGACTGGTGAAATCACTGTTACTTTCAATGCCGCAAACGTGGGTAA
TATTCCGGCTAACTCTACCCTGGTATTTACTCCCTATGTGCAGAATGCTGCCGGTGCCCCGACTCAATTGGGTGCCAGTT
ATGCTTCCGGTGTGACTGGCTCTATTGACTGGGGTTGTGCATCGGACTCCAACGCGGTTTCCAGTGGTACCGACCGCAAT
ATGCCTGCCCTGACTGCAGGTACCCTGCCGGCTCGTTTCGCTCCTAGCGAATGCCGCTAA
ATGACAGCTCAGAAAGGCTTTACCTTGATCGAACTGATGATCGTGGTTGCGATCATCGGTATTCTTGCTGCCGTCGCTTT
GCCGGCATATCAGGATTACACCATTCGTGCTCGCGTGACAGAGGGGGTTGGCTTGGCTGCCAGCGCCAAGACGCTTATTG
GCGATAGCTCTGCCACTGCCGGTGAGCTAGCCGCTTCGGCAAGGGTCTGGAATGCTCAAGCCGGTAACGCCGGTGCTACC
AGTAAGTATGTGACCTCTGTACAAATTGCAGAGGCGACTGGTGAAATCACTGTTACTTTCAATGCCGCAAACGTGGGTAA
TATTCCGGCTAACTCTACCCTGGTATTTACTCCCTATGTGCAGAATGCTGCCGGTGCCCCGACTCAATTGGGTGCCAGTT
ATGCTTCCGGTGTGACTGGCTCTATTGACTGGGGTTGTGCATCGGACTCCAACGCGGTTTCCAGTGGTACCGACCGCAAT
ATGCCTGCCCTGACTGCAGGTACCCTGCCGGCTCGTTTCGCTCCTAGCGAATGCCGCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Neisseria elongata subsp. glycolytica ATCC 29315 |
41.451 |
100 |
0.447 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
44.444 |
100 |
0.447 |
| pilA2 | Legionella pneumophila str. Paris |
42.373 |
98.883 |
0.419 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
41.808 |
98.883 |
0.413 |
| comP | Acinetobacter baylyi ADP1 |
38.889 |
100 |
0.391 |