Detailed information
Overview
| Name | comGG/cglG | Type | Machinery gene |
| Locus tag | SPNOXC_RS09935 | Genome accession | NC_017592 |
| Coordinates | 1832112..1832525 (-) | Length | 137 a.a. |
| NCBI ID | WP_000265624.1 | Uniprot ID | - |
| Organism | Streptococcus pneumoniae OXC141 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1827112..1837525
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SPNOXC_RS09905 (SPNOXC17980) | - | 1827807..1828631 (-) | 825 | WP_001809383.1 | membrane protein insertase YidC | - |
| SPNOXC_RS09910 (SPNOXC17990) | rnpA | 1828606..1828977 (-) | 372 | WP_000739244.1 | ribonuclease P protein component | - |
| SPNOXC_RS13370 | - | 1828994..1829125 (-) | 132 | WP_000768904.1 | hypothetical protein | - |
| SPNOXC_RS09915 (SPNOXC18000) | - | 1829126..1830316 (-) | 1191 | WP_000167765.1 | acetate kinase | - |
| SPNOXC_RS09920 (SPNOXC18010) | comYH | 1830367..1831320 (-) | 954 | WP_000345099.1 | class I SAM-dependent methyltransferase | Machinery gene |
| SPNOXC_RS12020 (SPNOXC18020) | - | 1831381..1831975 (-) | 595 | Protein_1876 | methyltransferase domain-containing protein | - |
| SPNOXC_RS09935 (SPNOXC18030) | comGG/cglG | 1832112..1832525 (-) | 414 | WP_000265624.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| SPNOXC_RS09940 (SPNOXC18040) | comGF/cglF | 1832503..1832964 (-) | 462 | WP_000250542.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| SPNOXC_RS09945 (SPNOXC18050) | comGE/cglE | 1832927..1833229 (-) | 303 | WP_000413382.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| SPNOXC_RS09950 (SPNOXC18060) | comGD/cglD | 1833192..1833596 (-) | 405 | WP_000588013.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| SPNOXC_RS09955 (SPNOXC18070) | comGC/cglC | 1833589..1833915 (-) | 327 | WP_000738636.1 | comG operon protein ComGC | Machinery gene |
| SPNOXC_RS09960 (SPNOXC18080) | comGB/cglB | 1833917..1834933 (-) | 1017 | WP_074017570.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| SPNOXC_RS09965 (SPNOXC18090) | comGA/cglA/cilD | 1834881..1835822 (-) | 942 | WP_000249552.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| SPNOXC_RS09970 (SPNOXC18100) | - | 1835898..1836263 (-) | 366 | WP_000286415.1 | DUF1033 family protein | - |
| SPNOXC_RS09975 (SPNOXC18110) | - | 1836414..1837472 (-) | 1059 | WP_000649468.1 | zinc-dependent alcohol dehydrogenase family protein | - |
Sequence
Protein
Download Length: 137 a.a. Molecular weight: 15955.42 Da Isoelectric Point: 10.2472
>NTDB_id=49268 SPNOXC_RS09935 WP_000265624.1 1832112..1832525(-) (comGG/cglG) [Streptococcus pneumoniae OXC141]
MWKKKKVKAGVLLYAVTIAAIFSLLLQFYLNRQVAHYQDYALNKEKLVAFAMAKRTKDKVEQESGEQVFNLGQVSYQNKK
TGLVTRVRTDKSQYEFLFPSVKIKEEKRDKKEEVATDSSEKVEKKKSEEKPEKKENS
MWKKKKVKAGVLLYAVTIAAIFSLLLQFYLNRQVAHYQDYALNKEKLVAFAMAKRTKDKVEQESGEQVFNLGQVSYQNKK
TGLVTRVRTDKSQYEFLFPSVKIKEEKRDKKEEVATDSSEKVEKKKSEEKPEKKENS
Nucleotide
Download Length: 414 bp
>NTDB_id=49268 SPNOXC_RS09935 WP_000265624.1 1832112..1832525(-) (comGG/cglG) [Streptococcus pneumoniae OXC141]
GTGTGGAAAAAGAAAAAAGTTAAGGCAGGTGTTCTCCTCTACGCAGTCACCATAGCAGCCATCTTTAGTCTTTTGTTGCA
ATTTTATTTGAACCGACAAGTCGCCCACTATCAAGACTATGCTTTGAATAAAGAAAAATTGGTTGCTTTTGCTATGGCTA
AACGAACCAAAGATAAGGTTGAGCAAGAAAGTGGGGAACAGGTTTTTAATCTAGGTCAGGTAAGCTATCAAAACAAGAAA
ACTGGCTTAGTGACGAGGGTTCGTACGGATAAGAGCCAATATGAGTTTCTGTTTCCTTCAGTCAAAATCAAAGAAGAGAA
AAGAGATAAAAAGGAAGAGGTAGCGACCGATTCAAGCGAAAAAGTGGAGAAGAAAAAATCAGAAGAGAAGCCTGAAAAGA
AAGAGAATTCCTAG
GTGTGGAAAAAGAAAAAAGTTAAGGCAGGTGTTCTCCTCTACGCAGTCACCATAGCAGCCATCTTTAGTCTTTTGTTGCA
ATTTTATTTGAACCGACAAGTCGCCCACTATCAAGACTATGCTTTGAATAAAGAAAAATTGGTTGCTTTTGCTATGGCTA
AACGAACCAAAGATAAGGTTGAGCAAGAAAGTGGGGAACAGGTTTTTAATCTAGGTCAGGTAAGCTATCAAAACAAGAAA
ACTGGCTTAGTGACGAGGGTTCGTACGGATAAGAGCCAATATGAGTTTCTGTTTCCTTCAGTCAAAATCAAAGAAGAGAA
AAGAGATAAAAAGGAAGAGGTAGCGACCGATTCAAGCGAAAAAGTGGAGAAGAAAAAATCAGAAGAGAAGCCTGAAAAGA
AAGAGAATTCCTAG
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGG/cglG | Streptococcus pneumoniae Rx1 |
99.27 |
100 |
0.993 |
| comGG/cglG | Streptococcus pneumoniae D39 |
99.27 |
100 |
0.993 |
| comGG/cglG | Streptococcus pneumoniae R6 |
99.27 |
100 |
0.993 |
| comGG/cglG | Streptococcus pneumoniae TIGR4 |
99.27 |
100 |
0.993 |
| comGG/cglG | Streptococcus mitis SK321 |
87.591 |
100 |
0.876 |
| comGG/cglG | Streptococcus mitis NCTC 12261 |
89.256 |
88.321 |
0.788 |
| comYG | Streptococcus mutans UA140 |
38.806 |
97.81 |
0.38 |
| comYG | Streptococcus mutans UA159 |
38.806 |
97.81 |
0.38 |