Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | TTJL18_RS03330 | Genome accession | NC_017587 |
| Coordinates | 588540..589121 (-) | Length | 193 a.a. |
| NCBI ID | WP_014629294.1 | Uniprot ID | H9ZQG2 |
| Organism | Thermus thermophilus JL-18 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 583540..594121
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| TTJL18_RS03310 (TtJL18_0663) | - | 583642..584196 (-) | 555 | WP_014629290.1 | shikimate kinase | - |
| TTJL18_RS03315 (TtJL18_0664) | aroC | 584221..585372 (-) | 1152 | WP_041444488.1 | chorismate synthase | - |
| TTJL18_RS03320 (TtJL18_0665) | pilQ | 585431..587698 (-) | 2268 | WP_014629292.1 | secretin N-terminal domain-containing protein | Machinery gene |
| TTJL18_RS03325 (TtJL18_0666) | pilW | 587695..588543 (-) | 849 | WP_014629293.1 | hypothetical protein | Machinery gene |
| TTJL18_RS03330 (TtJL18_0667) | pilO | 588540..589121 (-) | 582 | WP_014629294.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| TTJL18_RS03335 (TtJL18_0668) | pilN | 589111..589734 (-) | 624 | WP_014629295.1 | competence protein | Machinery gene |
| TTJL18_RS03340 (TtJL18_0669) | pilM | 589727..590860 (-) | 1134 | WP_014629296.1 | type IV pilus assembly protein PilM | Machinery gene |
| TTJL18_RS03345 (TtJL18_0670) | - | 590990..591994 (-) | 1005 | WP_014629297.1 | homoisocitrate dehydrogenase | - |
| TTJL18_RS03350 (TtJL18_0671) | - | 592049..592540 (-) | 492 | WP_011173430.1 | DUF5317 domain-containing protein | - |
| TTJL18_RS03355 (TtJL18_0672) | - | 592591..594027 (-) | 1437 | WP_049793115.1 | HD domain-containing phosphohydrolase | - |
Sequence
Protein
Download Length: 193 a.a. Molecular weight: 21408.76 Da Isoelectric Point: 6.4681
>NTDB_id=49118 TTJL18_RS03330 WP_014629294.1 588540..589121(-) (pilO) [Thermus thermophilus JL-18]
MLARLGQREWALLAMVLTALLGLLWYYLLIVPTRQEIATVRQEIDRLTIERNRGLQARRALPELRATIAALQAQRLAFLR
ALPREERLAEVLSEVLQDAEASGVVVRSFTRSRTSAPVPEVRAVNLALALEAPFPEIYAYLRRLEDLSRFSTLSGLNLSV
QSQEANPTLATGLTLTVYVLAQGVEEETGGSTP
MLARLGQREWALLAMVLTALLGLLWYYLLIVPTRQEIATVRQEIDRLTIERNRGLQARRALPELRATIAALQAQRLAFLR
ALPREERLAEVLSEVLQDAEASGVVVRSFTRSRTSAPVPEVRAVNLALALEAPFPEIYAYLRRLEDLSRFSTLSGLNLSV
QSQEANPTLATGLTLTVYVLAQGVEEETGGSTP
Nucleotide
Download Length: 582 bp
>NTDB_id=49118 TTJL18_RS03330 WP_014629294.1 588540..589121(-) (pilO) [Thermus thermophilus JL-18]
GTGCTCGCTAGGCTGGGACAGCGGGAGTGGGCCCTCCTGGCCATGGTCCTCACCGCCCTCCTGGGGCTCCTCTGGTACTA
CCTGCTCATCGTGCCCACGAGGCAGGAGATCGCCACCGTCCGGCAGGAGATTGACCGCCTCACCATAGAGCGCAACCGCG
GGCTCCAGGCCCGCCGGGCCCTTCCCGAGCTCCGCGCCACCATCGCCGCCCTTCAGGCCCAAAGGCTCGCCTTCCTCCGG
GCCCTGCCCCGGGAGGAAAGGCTCGCCGAGGTCCTCTCCGAGGTGCTCCAGGACGCGGAGGCGAGCGGGGTGGTGGTCCG
AAGCTTCACCCGAAGCCGCACCTCGGCCCCGGTGCCCGAGGTGCGGGCCGTGAACCTGGCCCTGGCCCTCGAGGCCCCCT
TTCCCGAAATCTACGCCTATCTGCGGCGCCTGGAGGACCTCTCCCGCTTCAGCACCCTTTCCGGCCTCAACCTGAGCGTC
CAGAGCCAGGAAGCGAACCCCACCCTCGCCACCGGCCTCACCTTGACCGTCTACGTGCTGGCCCAGGGGGTGGAGGAGGA
AACGGGAGGGAGCACCCCATGA
GTGCTCGCTAGGCTGGGACAGCGGGAGTGGGCCCTCCTGGCCATGGTCCTCACCGCCCTCCTGGGGCTCCTCTGGTACTA
CCTGCTCATCGTGCCCACGAGGCAGGAGATCGCCACCGTCCGGCAGGAGATTGACCGCCTCACCATAGAGCGCAACCGCG
GGCTCCAGGCCCGCCGGGCCCTTCCCGAGCTCCGCGCCACCATCGCCGCCCTTCAGGCCCAAAGGCTCGCCTTCCTCCGG
GCCCTGCCCCGGGAGGAAAGGCTCGCCGAGGTCCTCTCCGAGGTGCTCCAGGACGCGGAGGCGAGCGGGGTGGTGGTCCG
AAGCTTCACCCGAAGCCGCACCTCGGCCCCGGTGCCCGAGGTGCGGGCCGTGAACCTGGCCCTGGCCCTCGAGGCCCCCT
TTCCCGAAATCTACGCCTATCTGCGGCGCCTGGAGGACCTCTCCCGCTTCAGCACCCTTTCCGGCCTCAACCTGAGCGTC
CAGAGCCAGGAAGCGAACCCCACCCTCGCCACCGGCCTCACCTTGACCGTCTACGTGCTGGCCCAGGGGGTGGAGGAGGA
AACGGGAGGGAGCACCCCATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Thermus thermophilus HB27 |
98.446 |
100 |
0.984 |