Detailed information    

insolico Bioinformatically predicted

Overview

Name   comD/blpH   Type   Regulator
Locus tag   MSA_RS09915 Genome accession   NC_021486
Coordinates   1914701..1916035 (-) Length   444 a.a.
NCBI ID   WP_016481280.1    Uniprot ID   -
Organism   Streptococcus agalactiae ILRI005     
Function   phosphorylation of ComE; regulation of comX expression (predicted from homology)   
Competence regulation

Genomic Context

Location: 1909701..1921035
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MSA_RS09885 (MSA_20420) - 1910299..1910802 (-) 504 Protein_1877 hypothetical protein -
  MSA_RS11425 - 1910839..1911512 (-) 674 Protein_1878 transposase -
  MSA_RS11435 (MSA_20450) - 1911733..1911915 (+) 183 WP_001866975.1 hypothetical protein -
  MSA_RS09900 (MSA_20460) - 1911910..1913064 (-) 1155 WP_000623425.1 ABC transporter permease subunit -
  MSA_RS09905 (MSA_20470) - 1913070..1913917 (-) 848 Protein_1881 ABC transporter ATP-binding protein -
  MSA_RS11440 (MSA_20480) - 1913986..1914159 (-) 174 WP_000683600.1 hypothetical protein -
  MSA_RS09910 (MSA_20500) - 1914448..1914612 (+) 165 Protein_1883 cysteine peptidase family C39 domain-containing protein -
  MSA_RS09915 (MSA_20520) comD/blpH 1914701..1916035 (-) 1335 WP_016481280.1 GHKL domain-containing protein Regulator
  MSA_RS09920 (MSA_20530) comE/blpR 1916032..1916784 (-) 753 WP_001019939.1 LytTR family transcriptional regulator DNA-binding domain-containing protein Regulator
  MSA_RS09925 (MSA_20550) - 1917000..1917815 (-) 816 WP_016481281.1 endonuclease/exonuclease/phosphatase family protein -
  MSA_RS09930 (MSA_20560) - 1917869..1920049 (-) 2181 WP_016481282.1 PTS transporter subunit IIBC -

Sequence

Protein


Download         Length: 444 a.a.        Molecular weight: 51266.99 Da        Isoelectric Point: 8.2900

>NTDB_id=49120 MSA_RS09915 WP_016481280.1 1914701..1916035(-) (comD/blpH) [Streptococcus agalactiae ILRI005]
MNSTLSILEIALTIILTIFLFSKISGRQLTLIEIGICIALRLGLVILFIAANTIINLSFLKYWLLPIYMLSLAFLLLRPI
SKTLVVFYGLFPIVLRNLCSRSLAFFVFPLFNIDFHTTNQGFWGYFVDVLSTLCVLLFLRWMQYDFKALRSSEVSPTDRR
ILQFTNGCMVSYYLLMQFLTYFEYELAINTVIYRQFLLVAYWIIFTGAIASLDRRLRNSLQERLAVQRELQLANMIDYSH
HIEGLYKEVRSFRHDYSNMLTTLKLGIDNEDISIVKSVYQSIFKESNTHFRHPKYNIDRLVNVDNPALKSLLAAKLSQAI
DNHIMVSIEVSDSIKPQGMELIDFITIVSVLWDNAIEASLETDDPKIAMSYFTLKHKQIFIIENSTKEKAIDTSTIFNYE
ISSKGRNRGIGLYNVRGVINRYPNISIATSSQDFSFCQTFEIIL

Nucleotide


Download         Length: 1335 bp        

>NTDB_id=49120 MSA_RS09915 WP_016481280.1 1914701..1916035(-) (comD/blpH) [Streptococcus agalactiae ILRI005]
ATGAATTCTACTCTATCCATCTTAGAGATAGCTTTAACGATAATATTAACAATATTTCTCTTTTCTAAAATCAGTGGACG
TCAATTGACTTTAATAGAGATTGGAATTTGTATTGCTCTGAGATTAGGACTTGTAATTTTATTTATAGCAGCTAATACTA
TTATTAATCTTTCATTTCTAAAGTACTGGCTTCTCCCCATCTATATGTTAAGTCTGGCTTTCTTGTTGCTAAGACCTATA
TCTAAAACTTTAGTAGTCTTTTATGGCTTGTTTCCAATTGTTCTCAGAAATCTTTGTTCACGTTCTTTAGCTTTTTTTGT
CTTTCCTTTGTTTAATATTGATTTTCATACAACCAACCAGGGGTTTTGGGGATATTTTGTTGATGTCTTGTCTACTCTTT
GTGTTCTCCTATTTTTAAGATGGATGCAATACGATTTTAAAGCATTGCGAAGTAGTGAAGTTTCGCCAACAGATAGGAGA
ATTCTCCAATTTACGAATGGGTGCATGGTGAGTTATTACTTATTGATGCAGTTTTTAACTTACTTCGAATATGAATTAGC
CATCAATACTGTTATTTACCGACAATTTTTGCTTGTTGCTTATTGGATTATATTTACGGGAGCAATAGCCAGTTTAGACC
GGAGACTTCGAAATTCTTTACAGGAGAGGTTAGCTGTTCAAAGAGAACTCCAATTGGCTAATATGATAGATTATAGCCAC
CATATTGAGGGGTTGTATAAAGAAGTTAGGAGCTTCCGACATGATTATAGTAACATGTTAACGACCTTGAAACTAGGGAT
TGATAATGAAGATATATCTATTGTCAAATCAGTTTATCAGTCTATCTTTAAAGAATCTAATACACATTTCCGACATCCTA
AGTATAATATAGACCGGTTGGTTAATGTAGATAACCCAGCCTTAAAAAGTCTTTTAGCAGCCAAGCTTTCACAAGCGATA
GACAATCATATTATGGTATCTATAGAAGTATCAGACAGTATTAAACCTCAAGGGATGGAACTGATTGATTTTATTACCAT
TGTATCTGTTTTATGGGATAACGCTATTGAGGCATCTTTAGAGACAGACGATCCTAAGATAGCCATGTCTTATTTTACAT
TAAAACATAAACAAATTTTTATCATAGAAAATTCAACTAAGGAAAAGGCAATAGATACGTCAACGATATTCAATTATGAG
ATAAGTAGTAAGGGGCGGAATAGAGGAATAGGTCTTTACAATGTCAGGGGAGTTATCAATCGTTATCCAAATATTTCTAT
TGCAACAAGTAGCCAAGATTTTAGTTTCTGCCAAACTTTCGAAATCATATTATAG

Domains

Predicted by InterProScan.

GHKL domain (HATPase_c_5)

(339-439)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comD/blpH Streptococcus mutans UA159

35.903

100

0.367

Multiple sequence alignment