Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Machinery gene
Locus tag   TTJL18_RS04145 Genome accession   NC_017587
Coordinates   753179..754897 (-) Length   572 a.a.
NCBI ID   WP_014629426.1    Uniprot ID   H9ZQX4
Organism   Thermus thermophilus JL-18     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 748179..759897
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  TTJL18_RS04115 (TtJL18_0825) trpS 748794..749807 (+) 1014 WP_014629419.1 tryptophan--tRNA ligase -
  TTJL18_RS04120 (TtJL18_0826) - 749804..750460 (+) 657 WP_014629420.1 chromosome segregation protein ScpA -
  TTJL18_RS04125 (TtJL18_0827) - 750480..751037 (+) 558 WP_041444427.1 Uma2 family endonuclease -
  TTJL18_RS04130 (TtJL18_0829) - 751381..751893 (-) 513 WP_222842107.1 coiled-coil domain-containing protein -
  TTJL18_RS04135 (TtJL18_0830) - 752086..752445 (-) 360 WP_014629424.1 prepilin-type N-terminal cleavage/methylation domain-containing protein -
  TTJL18_RS04140 (TtJL18_0831) - 752518..752913 (-) 396 WP_014629425.1 prepilin-type N-terminal cleavage/methylation domain-containing protein -
  TTJL18_RS04145 (TtJL18_0832) comZ 753179..754897 (-) 1719 WP_014629426.1 pilus assembly PilX N-terminal domain-containing protein Machinery gene
  TTJL18_RS04150 (TtJL18_0833) pilA/pilA3 754908..755609 (-) 702 WP_014629427.1 PilW family protein Machinery gene
  TTJL18_RS04155 (TtJL18_0834) pilA/pilA2 755606..756187 (-) 582 WP_014629428.1 prepilin-type N-terminal cleavage/methylation domain-containing protein Machinery gene
  TTJL18_RS04160 (TtJL18_0835) - 756184..756657 (-) 474 WP_014629429.1 GspH/FimT family protein -
  TTJL18_RS04165 (TtJL18_0836) pilA/pilA1 756713..757183 (-) 471 WP_014629430.1 GspH/FimT family protein Machinery gene
  TTJL18_RS04170 (TtJL18_0837) - 757349..758329 (+) 981 WP_014629431.1 YpdA family putative bacillithiol disulfide reductase -

Sequence

Protein


Download         Length: 572 a.a.        Molecular weight: 61720.36 Da        Isoelectric Point: 5.4077

>NTDB_id=49121 TTJL18_RS04145 WP_014629426.1 753179..754897(-) (comZ) [Thermus thermophilus JL-18]
MNRKGIALVATLALMVVIALLVFGTFFTTQIELWTTRNDTTSVQAFYAAEAGLQKYKAALFQQYVWREQQDRTGGGSGCF
TSLATGLDLDRDGTLTPFVNNRLVLAQGEVVTDANGNPVGRYTVTLYKDAEDSQLFTLVSEGTSGGAKARVQATFRISNS
DYLEQAIFAGAGQANKWLNGGAIIRGGLYVVGNPDNPDQTVIEANGNFALYNWYDLGDYASVSNRVEPAYQRADDLCASL
RVQYGKISVGGSTQIGEPENRVKGVFVGRGTQDITGQNVGVCQNNKGVCTEAMGGFDLSDPPPFPTLDAKLDSEACQNYP
TWRACLRDRGALRIRWDGDEVRIAQPQDQELKNCLNVLQGVLENGGNRNKGNRGDGVLVLDQQTVDCTFTRPDGSKGGFK
YTYTGGKKSGQGLLEVYGDVVLEGINVVLNQPTEYRAQSGSAKSATLAVLAYGGMGGNMDINGNLLPDTIHGLFPSHALG
LIAEGNIYQRGQYVMAPVYAGGAFRVVKDNVLFGSVISNEFCTTSAGDKTDCNAGQKAEVVYIRIPKENRPVLLPSLRGG
KPVFQVLSYERR

Nucleotide


Download         Length: 1719 bp        

>NTDB_id=49121 TTJL18_RS04145 WP_014629426.1 753179..754897(-) (comZ) [Thermus thermophilus JL-18]
GTGAACCGCAAAGGAATCGCCCTCGTAGCCACTTTGGCCCTCATGGTGGTCATCGCCCTCCTCGTCTTCGGCACCTTCTT
CACCACCCAGATAGAGCTCTGGACCACCCGCAACGACACCACCTCGGTTCAGGCCTTCTACGCCGCCGAGGCCGGCCTGC
AGAAGTACAAGGCCGCCCTCTTCCAGCAGTACGTCTGGCGGGAGCAACAGGACAGGACGGGGGGAGGTAGCGGCTGCTTC
ACCTCCTTGGCCACGGGGCTGGACCTGGACCGGGACGGGACCCTCACGCCCTTCGTCAACAACCGGCTGGTCCTGGCGCA
AGGCGAGGTGGTCACCGATGCGAACGGCAACCCTGTGGGGCGATACACGGTAACCCTTTACAAGGACGCCGAGGACAGCC
AGCTCTTCACCCTGGTCTCCGAGGGCACCTCGGGCGGGGCCAAGGCCCGGGTCCAGGCCACCTTCCGCATCAGCAACTCG
GACTACCTGGAGCAGGCCATCTTCGCCGGCGCGGGCCAGGCGAACAAGTGGTTGAACGGCGGGGCCATCATCCGGGGCGG
GCTCTACGTGGTGGGGAACCCTGACAACCCAGACCAAACCGTTATAGAGGCCAACGGCAACTTCGCCCTCTACAACTGGT
ACGATCTCGGCGACTACGCAAGCGTCAGCAACCGGGTGGAGCCCGCCTACCAAAGGGCCGACGACCTTTGCGCAAGCCTT
AGGGTCCAGTACGGCAAGATCAGCGTGGGAGGAAGCACCCAGATCGGCGAGCCCGAGAACCGGGTGAAGGGGGTCTTCGT
GGGCCGGGGAACCCAGGACATCACCGGCCAGAACGTGGGGGTCTGCCAGAACAACAAAGGGGTCTGCACCGAGGCCATGG
GGGGCTTTGACCTTTCCGACCCGCCCCCCTTCCCCACCCTGGACGCCAAGCTGGACTCGGAGGCCTGCCAGAACTACCCC
ACGTGGCGGGCGTGCCTGCGGGACAGAGGGGCCCTCCGCATCCGGTGGGATGGGGACGAGGTGAGGATCGCCCAACCCCA
GGACCAGGAGCTTAAGAACTGCCTAAACGTCCTCCAGGGCGTCCTCGAAAACGGAGGGAACAGAAACAAAGGGAATAGGG
GCGACGGCGTCTTGGTCTTGGACCAACAAACCGTGGATTGCACCTTCACCCGTCCGGACGGGAGCAAGGGCGGGTTCAAG
TACACCTACACGGGCGGCAAGAAGAGCGGGCAAGGGCTTTTGGAGGTCTACGGCGACGTGGTGCTGGAGGGCATCAACGT
GGTCCTGAATCAGCCCACGGAGTACAGGGCCCAGTCGGGGAGCGCCAAAAGCGCCACCCTGGCCGTCTTGGCCTATGGGG
GCATGGGGGGGAACATGGACATCAACGGTAACCTCCTCCCCGACACCATCCACGGGCTTTTCCCCAGCCACGCTTTGGGC
CTCATCGCCGAAGGAAATATCTACCAGCGGGGCCAGTACGTGATGGCCCCCGTGTACGCCGGGGGCGCCTTCCGGGTGGT
GAAGGACAACGTCCTCTTCGGCTCGGTCATCAGCAACGAGTTCTGCACCACGAGCGCCGGGGACAAGACGGACTGCAACG
CCGGCCAAAAGGCCGAGGTGGTCTATATCCGCATCCCCAAGGAAAACCGCCCCGTGCTCCTGCCGAGCCTTCGTGGGGGG
AAGCCCGTCTTTCAGGTGCTCTCCTATGAGCGCCGCTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB H9ZQX4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Thermus thermophilus HB27

80.279

100

0.804

Multiple sequence alignment