Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   SESEC_RS09405 Genome accession   NC_017582
Coordinates   1985886..1987151 (-) Length   421 a.a.
NCBI ID   WP_014623560.1    Uniprot ID   -
Organism   Streptococcus equi subsp. zooepidemicus ATCC 35246     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1980886..1992151
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SESEC_RS09395 (SeseC_02396) - 1983151..1983708 (-) 558 WP_014623558.1 nucleotidyltransferase family protein -
  SESEC_RS09400 (SeseC_02397) - 1983760..1985616 (-) 1857 WP_012677328.1 proline--tRNA ligase -
  SESEC_RS09405 (SeseC_02399) eeP 1985886..1987151 (-) 1266 WP_014623560.1 RIP metalloprotease RseP Regulator
  SESEC_RS09410 (SeseC_02400) - 1987183..1987977 (-) 795 WP_014623561.1 phosphatidate cytidylyltransferase -
  SESEC_RS09415 (SeseC_02401) - 1987987..1988736 (-) 750 WP_014623562.1 isoprenyl transferase -
  SESEC_RS09420 (SeseC_02403) yajC 1988910..1989269 (-) 360 WP_014623563.1 preprotein translocase subunit YajC -
  SESEC_RS09425 (SeseC_02404) traF 1989383..1989745 (-) 363 WP_014623564.1 conjugal transfer protein TraF -
  SESEC_RS09430 (SeseC_02406) - 1989854..1991470 (-) 1617 WP_038674726.1 glycoside hydrolase family 13 protein -

Sequence


Protein


Download         Length: 421 a.a.        Molecular weight: 45998.51 Da        Isoelectric Point: 5.9240

>NTDB_id=49079 SESEC_RS09405 WP_014623560.1 1985886..1987151(-) (eeP) [Streptococcus equi subsp. zooepidemicus ATCC 35246]
MLGIITFIIIFGILVIVHEFGHFYFAKRSGILVREFAIGMGPKIFSHVDQQGTLYTIRLLPLGGYVRMAGWGDDTTEIKT
GTPASLTLNDQGLVKRINLSQSKLDPTSLPMNVTAYDLEDKLTITGLVLDEIKTYSVDHDATIVEEDGTEIRIAPLDVQY
QNASIGGRLITNFAGPMNNFILGIVVFILFAFVQGGVADYHSNHIRVVENGAAAKAGIRDNDQILEINHQKINDWYELTQ
AVTDSAADVKAKGKLEITYQTGDQVKTIALKPEKKGDQYLIGVQYPLKTSLTDKLIGGFEMAGNGALVIVTALKSLITSF
SLDKLGGPVAMYQMSNQAAKNGLESVLSLMAMLSINLGIFNLIPIPALDGGKILMNVIEALRRKPLKQETETYITLAGVA
IMVVLMIAVTWNDIMRAFFQG

Nucleotide


Download         Length: 1266 bp        

>NTDB_id=49079 SESEC_RS09405 WP_014623560.1 1985886..1987151(-) (eeP) [Streptococcus equi subsp. zooepidemicus ATCC 35246]
ATGTTAGGAATAATTACCTTTATTATTATTTTTGGTATTCTTGTGATTGTCCATGAGTTTGGCCATTTCTATTTTGCTAA
GCGGTCTGGTATTTTGGTCAGAGAGTTTGCTATTGGCATGGGACCAAAAATCTTTTCGCATGTTGATCAGCAAGGGACGC
TTTACACGATCCGGCTATTACCGCTTGGTGGCTATGTGCGAATGGCAGGCTGGGGTGATGACACGACTGAGATAAAAACA
GGAACACCTGCTAGCTTGACGCTTAATGATCAAGGCTTGGTCAAGCGGATTAACCTGTCTCAGAGCAAGCTTGATCCGAC
TAGCCTGCCTATGAATGTGACTGCTTATGACTTAGAAGATAAGTTGACGATTACAGGGCTGGTTCTTGATGAGATCAAGA
CCTATTCGGTAGACCATGACGCGACCATTGTCGAGGAGGACGGTACAGAGATCCGGATTGCGCCGCTTGATGTTCAGTAT
CAAAACGCAAGCATTGGCGGTCGTTTGATCACCAATTTTGCAGGACCTATGAATAATTTTATTCTAGGTATTGTTGTCTT
TATTTTGTTTGCCTTTGTTCAAGGTGGTGTGGCTGATTATCATAGCAACCATATTCGTGTGGTGGAAAATGGCGCAGCAG
CCAAGGCTGGTATTAGAGACAATGATCAGATTTTAGAGATTAATCATCAAAAGATTAATGACTGGTATGAGTTGACGCAG
GCCGTTACTGATTCAGCAGCAGATGTTAAGGCTAAGGGCAAGCTAGAGATTACCTATCAGACAGGTGATCAGGTTAAGAC
TATAGCACTGAAGCCTGAAAAAAAAGGCGATCAGTACCTTATTGGTGTCCAGTACCCACTAAAAACAAGTCTGACAGACA
AGCTAATAGGTGGCTTTGAGATGGCTGGTAATGGTGCTCTAGTGATTGTCACTGCTCTAAAGAGTTTGATTACCTCCTTT
AGCCTAGATAAATTAGGTGGGCCAGTTGCCATGTATCAGATGTCCAATCAGGCAGCAAAGAATGGTTTAGAGTCAGTCTT
GTCCTTGATGGCAATGCTCTCTATCAACTTAGGGATTTTCAATTTAATTCCGATTCCCGCACTAGATGGTGGTAAGATCC
TGATGAATGTGATTGAAGCACTTCGTCGTAAGCCATTAAAGCAAGAGACAGAGACTTATATTACCCTTGCAGGTGTTGCG
ATTATGGTGGTACTCATGATTGCAGTGACCTGGAACGATATTATGCGAGCCTTTTTCCAAGGCTGA

Domains


Predicted by InterproScan.

(206-237)

(6-405)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

68.333

99.762

0.682

  eeP Streptococcus thermophilus LMD-9

68.095

99.762

0.679


Multiple sequence alignment