Detailed information    

insolico Bioinformatically predicted

Overview

Name   agrA   Type   Regulator
Locus tag   IF743_RS13855 Genome accession   NZ_CP062439
Coordinates   2782210..2782926 (-) Length   238 a.a.
NCBI ID   WP_000688492.1    Uniprot ID   A0A7U7IEW1
Organism   Staphylococcus aureus strain NAS_AN_285     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2777210..2787926
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IF743_RS13835 (IF743_13820) - 2778304..2779254 (+) 951 WP_000790330.1 LacI family DNA-binding transcriptional regulator -
  IF743_RS13840 (IF743_13825) - 2779403..2780887 (+) 1485 WP_000141414.1 sucrose-6-phosphate hydrolase -
  IF743_RS13845 (IF743_13830) - 2780884..2781843 (+) 960 WP_001253312.1 carbohydrate kinase -
  IF743_RS13850 (IF743_13835) - 2782031..2782138 (-) 108 WP_001790167.1 hypothetical protein -
  IF743_RS13855 (IF743_13840) agrA 2782210..2782926 (-) 717 WP_000688492.1 LytTR family DNA-binding domain-containing protein Regulator
  IF743_RS13860 (IF743_13845) - 2782945..2784237 (-) 1293 WP_001549202.1 GHKL domain-containing protein -
  IF743_RS13865 (IF743_13850) - 2784262..2784402 (-) 141 WP_001093929.1 cyclic lactone autoinducer peptide -
  IF743_RS13870 (IF743_13855) agrB 2784399..2784968 (-) 570 WP_001105707.1 accessory gene regulator AgrB -
  IF743_RS14210 (IF743_13860) - 2785204..2785338 (+) 135 WP_001549197.1 delta-lysin family phenol-soluble modulin -
  IF743_RS13880 (IF743_13865) - 2785935..2786720 (-) 786 WP_240696802.1 carbon-nitrogen family hydrolase -
  IF743_RS13885 (IF743_13870) - 2787081..2787707 (-) 627 WP_000522384.1 nitroreductase family protein -

Sequence

Protein


Download         Length: 238 a.a.        Molecular weight: 27905.90 Da        Isoelectric Point: 6.0927

>NTDB_id=490179 IF743_RS13855 WP_000688492.1 2782210..2782926(-) (agrA) [Staphylococcus aureus strain NAS_AN_285]
MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVLEQAKNMNDIGCYFLDIQLSTDINGIKLGSEIRKHDP
VGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELRTRIIDCLETAHTRLQLLSKDNSVETIELKRGSNSVYVQYDDIM
FFESSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKEHCYASVRNVKKI

Nucleotide


Download         Length: 717 bp        

>NTDB_id=490179 IF743_RS13855 WP_000688492.1 2782210..2782926(-) (agrA) [Staphylococcus aureus strain NAS_AN_285]
ATGAAAATTTTCATTTGCGAAGACGATCCAAAACAAAGAGAAAACATGGTTACCATTATTAAAAATTATATAATGATAGA
AGAAAAGCCTATGGAAATTGCCCTCGCAACTGATAATCCTTATGAGGTGCTTGAGCAAGCTAAAAATATGAATGACATAG
GCTGTTACTTTTTAGATATTCAACTTTCAACTGATATTAATGGTATCAAATTAGGCAGTGAAATTCGTAAGCATGACCCA
GTTGGTAACATTATTTTCGTTACGAGTCACAGTGAACTTACCTATTTAACATTTGTCTACAAAGTTGCAGCGATGGATTT
TATTTTTAAAGATGATCCAGCTGAATTAAGAACTCGAATTATAGACTGTTTAGAAACTGCACATACACGCTTACAATTGT
TGTCTAAAGATAATAGCGTTGAAACGATTGAATTAAAACGTGGCAGTAATTCAGTGTATGTTCAATATGATGATATTATG
TTTTTTGAATCATCAACAAAATCTCACAGACTCATTGCCCATTTAGATAACCGTCAAATTGAATTTTATGGTAATTTAAA
AGAACTGAGTCAATTAGATGATCGTTTCTTTAGATGTCATAATAGCTTTGTCGTCAATCGCCATAATATTGAATCTATAG
ATTCGAAAGAGCGAATTGTCTATTTTAAAAATAAAGAACACTGCTATGCATCGGTGAGAAACGTTAAAAAAATATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-120)

LytTr DNA-binding domain (LytTR)

(151-237)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7IEW1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  agrA Staphylococcus aureus N315

100

100

1