Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   IGX38_RS20075 Genome accession   NZ_CP062162
Coordinates   4274902..4275309 (-) Length   135 a.a.
NCBI ID   WP_003282729.1    Uniprot ID   -
Organism   Stutzerimonas stutzeri strain 2020WEIHUA_G     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4269902..4280309
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IGX38_RS20055 (IGX38_20015) - 4270860..4271726 (-) 867 WP_043942369.1 CheR family methyltransferase -
  IGX38_RS20060 (IGX38_20020) - 4271787..4273835 (-) 2049 WP_242100365.1 methyl-accepting chemotaxis protein -
  IGX38_RS20065 (IGX38_20025) - 4273914..4274450 (-) 537 WP_013984316.1 chemotaxis protein CheW -
  IGX38_RS20070 (IGX38_20030) pilH 4274492..4274857 (-) 366 WP_003297216.1 twitching motility response regulator PilH -
  IGX38_RS20075 (IGX38_20035) pilG 4274902..4275309 (-) 408 WP_003282729.1 twitching motility response regulator PilG Regulator
  IGX38_RS20080 (IGX38_20040) gshB 4275546..4276496 (+) 951 WP_013984318.1 glutathione synthase -
  IGX38_RS20085 (IGX38_20045) - 4276584..4277477 (+) 894 WP_019405529.1 energy transducer TonB -
  IGX38_RS20090 (IGX38_20050) - 4277543..4278112 (+) 570 WP_011914961.1 YqgE/AlgH family protein -
  IGX38_RS20095 (IGX38_20055) ruvX 4278109..4278537 (+) 429 WP_011914962.1 Holliday junction resolvase RuvX -
  IGX38_RS20100 (IGX38_20060) pyrR 4278555..4279070 (+) 516 WP_014597998.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  IGX38_RS20105 (IGX38_20065) - 4279124..4280140 (+) 1017 WP_011914964.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14826.22 Da        Isoelectric Point: 7.2439

>NTDB_id=486631 IGX38_RS20075 WP_003282729.1 4274902..4275309(-) (pilG) [Stutzerimonas stutzeri strain 2020WEIHUA_G]
MEQHSEGLKVMVIDDSKTIRRTAETLLKKVGCDVITAVDGFDALAKIADTHPRIIFVDIMMPRLDGYQTCALIKNNSSFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPDFAPVEQAS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=486631 IGX38_RS20075 WP_003282729.1 4274902..4275309(-) (pilG) [Stutzerimonas stutzeri strain 2020WEIHUA_G]
ATGGAACAGCACTCCGAGGGCTTGAAGGTCATGGTGATCGACGATTCGAAAACGATTCGTCGCACTGCTGAAACCCTGCT
GAAGAAAGTAGGTTGCGATGTCATCACCGCAGTGGACGGTTTCGATGCCCTCGCCAAGATTGCGGATACTCATCCCCGCA
TCATCTTTGTCGATATTATGATGCCCAGGCTGGACGGTTATCAGACCTGCGCGTTGATCAAGAACAACAGTTCCTTCAAG
TCGACGCCAGTGATCATGCTGTCTTCTAAAGACGGCCTGTTCGACAAGGCGAAGGGGCGCATTGTCGGCTCCGATCAATA
CCTCACCAAACCGTTCAGCAAAGAAGAGCTGCTCGGTGCAATCAAGGCTCATGTCCCTGATTTCGCGCCGGTGGAGCAAG
CGTCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76

92.593

0.704
  vicR Streptococcus mutans UA159

42.857

93.333

0.4