Detailed information NTG0048607

Bioinformatically predicted

Overview

• Name: comGD
• Type: Machinery gene
• Locus tag: TL13_RS00795
• Genome accession: NC_021213
• Coordinates: 128671..129078 (+)
• Length: 135 a.a.
• NCBI ID: WP_015646273.1
• Uniprot ID: -
• Organism: Streptococcus suis TL13
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 123671..134078

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
TL13_RS00770 (TL13_0153)	-	125072..125437 (+)	366	WP_014637310.1	DUF1033 family protein	-
TL13_RS00775 (TL13_0154)	-	125472..126422 (-)	951	WP_014637311.1	S66 peptidase family protein	-
TL13_RS00780 (TL13_0155)	comGA	126508..127458 (+)	951	WP_015646270.1	competence type IV pilus ATPase ComGA	Machinery gene
TL13_RS00785 (TL13_0156)	comGB	127370..128407 (+)	1038	WP_051089044.1	competence type IV pilus assembly protein ComGB	Machinery gene
TL13_RS00790 (TL13_0157)	comGC	128409..128690 (+)	282	WP_015646272.1	competence type IV pilus major pilin ComGC	Machinery gene
TL13_RS00795 (TL13_0158)	comGD	128671..129078 (+)	408	WP_015646273.1	competence type IV pilus minor pilin ComGD	Machinery gene
TL13_RS00800 (TL13_0159)	comGE	129050..129343 (+)	294	WP_024401507.1	competence type IV pilus minor pilin ComGE	Machinery gene
TL13_RS00805 (TL13_0160)	comGF/cglF	129330..129764 (+)	435	WP_015646275.1	competence type IV pilus minor pilin ComGF	Machinery gene
TL13_RS00810 (TL13_0161)	comGG	129742..130155 (+)	414	WP_015646276.1	competence type IV pilus minor pilin ComGG	-
TL13_RS00815 (TL13_0162)	-	131334..132008 (-)	675	WP_015646277.1	head maturation protease, ClpP-related	-
TL13_RS00820 (TL13_0163)	-	131998..132489 (-)	492	WP_015646278.1	hypothetical protein	-
TL13_RS00825 (TL13_0164)	-	132502..133017 (-)	516	WP_041179361.1	hypothetical protein	-
TL13_RS10750 (TL13_0165)	-	133165..133332 (-)	168	WP_015646280.1	hypothetical protein	-
TL13_RS00830 (TL13_0166)	-	133376..133834 (-)	459	WP_015646281.1	hypothetical protein	-

Sequence

Protein

• Length: 135 a.a.
• Molecular weight: 15350.57 Da
• Isoelectric Point: 9.8864

>NTDB_id=48607 TL13_RS00795 WP_015646273.1 128671..129078(+) (comGD) [Streptococcus suis TL13]
MLRRKNKAFTLFESLLTLFVISFLAISLSGTVQTAFRSIQEEIFLWEFEAIYKDSQKLAASSHQKVNLAIGGQEVTNGYQ
AVEVPRNVEVLEGKTITFEENGGNSSLTKIRFRLSRKTVTYQLYIGSGRYKKTEE

Nucleotide

• Length: 408 bp

>NTDB_id=48607 TL13_RS00795 WP_015646273.1 128671..129078(+) (comGD) [Streptococcus suis TL13]
ATGCTACGGCGAAAAAATAAGGCTTTTACCCTGTTTGAAAGCCTGCTAACCTTATTTGTCATCAGCTTTCTGGCAATCAG
CCTGTCAGGAACGGTGCAAACGGCCTTTCGGTCTATTCAGGAAGAGATTTTTCTCTGGGAGTTTGAAGCCATCTATAAAG
ACAGTCAGAAATTGGCAGCCAGTTCCCACCAAAAAGTGAACCTTGCTATCGGTGGACAGGAGGTTACAAATGGTTATCAG
GCTGTAGAGGTACCCAGAAATGTAGAAGTATTGGAAGGGAAGACCATCACATTTGAAGAAAATGGTGGAAATTCTTCTCT
GACCAAGATTCGTTTTCGGCTGAGTCGAAAGACAGTCACGTATCAATTATATATAGGGAGTGGTCGCTATAAGAAAACAG
AAGAATAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD	Streptococcus gordonii str. Challis substr. CH1	48.819	94.074	0.459
comGD	Streptococcus mutans UA159	46.512	95.556	0.444
comGD	Streptococcus mutans UA140	46.512	95.556	0.444
comGD/cglD	Streptococcus pneumoniae Rx1	45.736	95.556	0.437
comGD/cglD	Streptococcus pneumoniae TIGR4	45.736	95.556	0.437
comGD/cglD	Streptococcus pneumoniae R6	45.736	95.556	0.437
comGD/cglD	Streptococcus pneumoniae D39	45.736	95.556	0.437
comGD/cglD	Streptococcus mitis NCTC 12261	44.961	95.556	0.43
comGD/cglD	Streptococcus mitis SK321	44.961	95.556	0.43
comGD	Lactococcus lactis subsp. cremoris KW2	38.281	94.815	0.363