Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxO   Type   Regulator
Locus tag   J7D37_RS10590 Genome accession   NZ_CP072526
Coordinates   2191006..2192499 (+) Length   497 a.a.
NCBI ID   WP_038348055.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain DETAB-E227     
Function   promote HapR production (predicted from homology)   
Competence regulation

Genomic Context

Location: 2186006..2197499
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J7D37_RS10565 (J7D37_10565) uppS 2186047..2186799 (-) 753 WP_031987429.1 polyprenyl diphosphate synthase -
  J7D37_RS10570 (J7D37_10570) frr 2186805..2187359 (-) 555 WP_000606428.1 ribosome recycling factor -
  J7D37_RS10575 (J7D37_10575) pyrH 2187445..2188173 (-) 729 WP_000852257.1 UMP kinase -
  J7D37_RS10580 (J7D37_10580) rimO 2188225..2189568 (-) 1344 WP_000856679.1 30S ribosomal protein S12 methylthiotransferase RimO -
  J7D37_RS10585 (J7D37_10585) glnL 2189910..2191019 (+) 1110 WP_000371970.1 nitrogen regulation protein NR(II) -
  J7D37_RS10590 (J7D37_10590) luxO 2191006..2192499 (+) 1494 WP_038348055.1 nitrogen regulation protein NR(I) Regulator
  J7D37_RS10595 (J7D37_10595) adeN 2192775..2193428 (+) 654 WP_000543880.1 multidrug efflux transcriptional repressor AdeN -
  J7D37_RS10600 (J7D37_10600) argF 2193541..2194461 (+) 921 WP_001207983.1 ornithine carbamoyltransferase -
  J7D37_RS10605 (J7D37_10605) - 2194656..2195180 (+) 525 WP_000209127.1 protein tyrosine phosphatase family protein -
  J7D37_RS10610 (J7D37_10610) ispF 2195177..2195659 (-) 483 WP_000226512.1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase -
  J7D37_RS10615 (J7D37_10615) - 2195763..2196407 (+) 645 WP_023896574.1 hypothetical protein -

Sequence

Protein


Download         Length: 497 a.a.        Molecular weight: 56239.05 Da        Isoelectric Point: 6.3155

>NTDB_id=483947 J7D37_RS10590 WP_038348055.1 2191006..2192499(+) (luxO) [Acinetobacter baumannii strain DETAB-E227]
MSRNKIWVIDDDRAMRWVLEKTFKEEGFDVTNFEEAQTALERLHHEAPDVILTDIRMPGIDGLTFLSKVKNSHPDLPVII
MTAHSDLESAVSSYQTGAFEYLPKPFDIDEALALVNRAILHINKLQQQEATKTASPLQSTEIIGESPAMQEVFRAIGRLS
QSHITVLINGESGTGKELVAHALHKHSPRRAKPFIALNMAAIPKDLIETELFGHEKGAFTGANTQHQGRFEQANGGTLFL
DEIGDMPFETQTRLLRVLADGEFYRVGGHIPVKVDVRIVAATHQDLEKLVNEGRFREDLYHRLNVIRIHIPKLAHRSEDI
PMLAQHFLARAGKELGVSPKILRTETTDYMQQLPWPGNVRQLENTCRWLTVMITGREVYPEDLPSELKQVPLQKSSETSQ
PAPSFERISLHHWDELLSQWAIQKLKNGEMKILDIATPMFERTLINAALQQTRGRKRHAAELLGWGRNTLTRKLKELGMD
SADDDDEDEHKATLSEA

Nucleotide


Download         Length: 1494 bp        

>NTDB_id=483947 J7D37_RS10590 WP_038348055.1 2191006..2192499(+) (luxO) [Acinetobacter baumannii strain DETAB-E227]
GTGTCGCGAAATAAAATATGGGTTATTGATGACGATCGCGCCATGCGATGGGTACTTGAAAAGACCTTTAAAGAAGAAGG
ATTTGACGTCACCAATTTTGAAGAAGCTCAAACAGCACTTGAACGTTTACATCATGAAGCGCCCGATGTCATCTTAACTG
ACATTCGTATGCCAGGTATTGATGGGTTAACTTTCTTATCTAAAGTGAAAAACTCTCACCCCGACTTGCCTGTTATCATT
ATGACAGCGCATTCGGACTTAGAGTCTGCTGTATCAAGCTATCAGACTGGTGCATTTGAGTATTTACCAAAACCATTTGA
TATTGATGAAGCTTTAGCTTTAGTCAATCGAGCAATTTTGCATATCAATAAGTTGCAGCAGCAAGAAGCGACAAAAACAG
CTTCACCACTGCAATCAACAGAAATTATTGGCGAATCTCCTGCTATGCAAGAGGTTTTCCGAGCGATTGGTCGTTTATCT
CAGTCGCATATTACCGTTTTAATTAATGGTGAATCAGGCACAGGTAAAGAACTGGTTGCGCATGCTTTACATAAACATTC
TCCACGACGCGCTAAGCCTTTTATTGCTTTAAACATGGCAGCAATTCCTAAAGATTTAATCGAAACGGAATTATTTGGTC
ATGAAAAAGGTGCTTTCACGGGTGCAAACACCCAACATCAAGGCCGCTTTGAACAAGCAAATGGCGGAACACTATTCCTT
GATGAAATTGGTGACATGCCCTTTGAAACGCAAACTCGACTACTGCGCGTACTCGCTGATGGTGAGTTCTATCGTGTAGG
TGGACACATTCCAGTTAAAGTTGATGTTCGAATCGTGGCGGCAACCCATCAAGACTTAGAAAAACTGGTGAATGAAGGTC
GTTTTCGTGAAGACTTATACCATCGTCTAAATGTTATTCGAATTCATATTCCGAAGCTTGCGCATCGCAGTGAAGACATC
CCTATGCTGGCTCAACATTTCTTGGCTCGCGCGGGTAAAGAGCTAGGTGTAAGTCCAAAGATTTTACGCACTGAAACAAC
GGACTATATGCAACAATTACCTTGGCCTGGTAATGTTCGTCAGCTTGAGAATACCTGCCGTTGGTTAACCGTCATGATTA
CTGGTCGTGAGGTTTATCCGGAAGATTTACCTTCTGAGCTTAAACAGGTTCCACTTCAAAAAAGTAGTGAGACTAGTCAG
CCAGCACCATCTTTTGAACGTATTTCTTTGCACCATTGGGATGAACTACTAAGCCAATGGGCAATTCAAAAACTTAAAAA
TGGTGAAATGAAGATATTAGACATTGCTACCCCAATGTTTGAGCGCACCTTAATTAATGCAGCACTACAGCAAACTCGTG
GGCGCAAACGTCATGCAGCTGAGCTGTTAGGTTGGGGCCGTAACACCCTAACCAGAAAGTTAAAAGAGCTAGGCATGGAT
TCTGCTGATGACGATGATGAGGACGAACATAAAGCAACTTTGTCAGAAGCTTAA

Domains

Predicted by InterProScan.

Bacterial regulatory protein, Fis family (HTH_8)

(439-477)

Response regulator receiver domain (Response_reg)

(6-115)

Sigma-54 interaction domain (Sigma54_activat)

(142-309)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxO Vibrio cholerae strain A1552

40.222

90.543

0.364
  pilR Pseudomonas aeruginosa PAK

37.5

96.579

0.362