Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   IC785_RS19510 Genome accession   NZ_CP061603
Coordinates   4010694..4011824 (+) Length   376 a.a.
NCBI ID   WP_077169691.1    Uniprot ID   A0A7H2W4S1
Organism   Acinetobacter seifertii strain AS53     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 4005694..4016824
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IC785_RS19485 (IC785_19480) - 4005956..4006162 (-) 207 WP_039252952.1 hypothetical protein -
  IC785_RS19490 (IC785_19485) - 4006216..4008331 (-) 2116 Protein_3828 TonB-dependent copper receptor -
  IC785_RS19495 (IC785_19490) - 4008405..4008830 (-) 426 WP_004705923.1 DUF2946 family protein -
  IC785_RS19500 (IC785_19495) def 4008866..4009396 (-) 531 WP_004705924.1 peptide deformylase -
  IC785_RS19505 (IC785_19500) tsaP 4009519..4010673 (+) 1155 WP_077166210.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  IC785_RS19510 (IC785_19505) dprA 4010694..4011824 (+) 1131 WP_077169691.1 DNA-processing protein DprA Machinery gene
  IC785_RS19515 (IC785_19510) - 4011875..4012444 (+) 570 WP_077169692.1 L-threonylcarbamoyladenylate synthase -
  IC785_RS19520 (IC785_19515) - 4012835..4013755 (-) 921 WP_004705929.1 DMT family transporter -
  IC785_RS19525 (IC785_19520) - 4013862..4014515 (-) 654 WP_077164355.1 TetR/AcrR family transcriptional regulator -
  IC785_RS19530 (IC785_19525) - 4014652..4015866 (+) 1215 WP_039252932.1 MFS transporter -
  IC785_RS19535 (IC785_19530) - 4015887..4016651 (+) 765 WP_077169693.1 AraC family transcriptional regulator -

Sequence


Protein


Download         Length: 376 a.a.        Molecular weight: 41890.51 Da        Isoelectric Point: 6.4979

>NTDB_id=483541 IC785_RS19510 WP_077169691.1 4010694..4011824(+) (dprA) [Acinetobacter seifertii strain AS53]
MLTQLSSHHYHTLKVWYLVQHSLVSFKKIIDYFGDCEKATQPDGLAKWQSLGLHANHLKRLNEFQTAQGQTEFERLIQQV
QQHTDFILTPDDVGYPTQLLPYTDHPPVIFGKGQAQALLQPQIAIVGSRKPSPHGRQVAYDFAYYLSEKGFYVSSGLAYG
IDEAAHQGASVHQRTIAVTGTGLDSTYPAQNRKLAEHILAQNGAIISEFLPGTPPLQQHFPRRNRIVSGLSLGVLVVEAT
LKSGSLITANKAAEQGKIVFAIPGHIYSEFHQGCHQLIREGAILVDHPEQIIEDLALPTQWQSQQNSTEEAIVSCTPEIP
EHLINLYQSLDWVGQNIDQLVLHHSQPVSELTSSLMELELLGLCMQQSGLYLRCRS

Nucleotide


Download         Length: 1131 bp        

>NTDB_id=483541 IC785_RS19510 WP_077169691.1 4010694..4011824(+) (dprA) [Acinetobacter seifertii strain AS53]
ATGCTTACCCAACTTTCTTCACACCATTACCACACACTTAAAGTGTGGTATTTGGTGCAACACTCATTAGTTAGCTTCAA
AAAAATTATTGATTATTTTGGAGACTGTGAAAAAGCCACTCAACCTGATGGTTTAGCAAAGTGGCAATCTCTTGGCTTAC
ATGCTAATCACTTAAAGCGTCTAAATGAGTTTCAAACGGCGCAAGGTCAAACCGAGTTTGAACGACTTATACAACAAGTT
CAGCAGCATACTGATTTTATTTTGACACCAGATGATGTTGGTTATCCAACTCAATTACTCCCTTATACAGATCATCCACC
TGTTATTTTTGGAAAAGGTCAGGCACAAGCATTATTACAACCGCAAATTGCGATTGTCGGTAGCCGAAAACCTAGCCCAC
ATGGTCGTCAGGTGGCTTATGATTTTGCCTATTATTTAAGTGAAAAAGGTTTTTATGTAAGTAGCGGCTTGGCATACGGC
ATTGATGAAGCAGCTCATCAAGGTGCATCTGTTCATCAACGTACGATAGCAGTGACAGGTACAGGTTTAGACAGTACCTA
TCCAGCTCAAAATAGAAAATTGGCAGAACATATTCTGGCTCAGAACGGCGCCATCATTAGTGAGTTTTTACCGGGAACAC
CACCACTACAGCAGCATTTTCCACGTAGAAACCGAATTGTTAGTGGTCTGAGTTTAGGCGTATTAGTTGTAGAAGCGACT
TTAAAAAGTGGCTCCCTTATTACTGCCAATAAAGCAGCTGAGCAAGGCAAAATCGTATTTGCCATTCCCGGTCATATTTA
CAGTGAATTTCATCAAGGTTGCCATCAACTTATTCGTGAAGGTGCAATTTTAGTCGATCACCCTGAACAAATTATTGAAG
ACCTCGCCCTACCCACCCAATGGCAGAGCCAACAAAACTCAACAGAGGAGGCTATCGTTTCTTGCACCCCAGAAATTCCA
GAGCATTTGATTAATCTTTATCAGTCTTTAGACTGGGTAGGCCAAAATATTGACCAGCTTGTTTTGCATCATTCACAACC
TGTTTCTGAACTCACCTCATCACTGATGGAACTAGAACTACTCGGTTTATGTATGCAACAATCAGGATTGTATTTACGTT
GTCGTTCTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A7H2W4S1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii strain A118

90.957

100

0.91

  dprA Acinetobacter baumannii D1279779

90.957

100

0.91

  dprA Acinetobacter baylyi ADP1

71.654

100

0.726

  dprA Vibrio cholerae strain A1552

43.505

88.032

0.383