Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   IBC04_RS00975 Genome accession   NZ_CP061020
Coordinates   171669..172418 (+) Length   249 a.a.
NCBI ID   WP_207560003.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain 24740     
Function   degradation of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 166669..177418
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IBC04_RS00950 (IBC04_00955) - 167244..167414 (+) 171 WP_023909348.1 hypothetical protein -
  IBC04_RS00955 (IBC04_00960) - 167695..168435 (-) 741 WP_002949253.1 amino acid ABC transporter ATP-binding protein -
  IBC04_RS00960 (IBC04_00965) - 168435..169985 (-) 1551 WP_014607891.1 ABC transporter substrate-binding protein/permease -
  IBC04_RS00965 (IBC04_00970) - 170188..171042 (+) 855 WP_014607892.1 undecaprenyl-diphosphate phosphatase -
  IBC04_RS00970 (IBC04_00975) - 171188..171403 (-) 216 WP_011226805.1 DUF3021 family protein -
  IBC04_RS00975 (IBC04_00980) mecA 171669..172418 (+) 750 WP_207560003.1 adaptor protein MecA Regulator
  IBC04_RS00980 (IBC04_00985) - 172422..173579 (+) 1158 WP_138496642.1 MraY family glycosyltransferase -
  IBC04_RS00985 (IBC04_00990) sufC 173740..174510 (+) 771 WP_002947634.1 Fe-S cluster assembly ATPase SufC -
  IBC04_RS00990 (IBC04_00995) sufD 174547..175809 (+) 1263 WP_011680669.1 Fe-S cluster assembly protein SufD -
  IBC04_RS00995 (IBC04_01000) - 175863..177095 (+) 1233 WP_011225367.1 cysteine desulfurase -

Sequence

Protein


Download         Length: 249 a.a.        Molecular weight: 29138.65 Da        Isoelectric Point: 4.0658

>NTDB_id=479510 IBC04_RS00975 WP_207560003.1 171669..172418(+) (mecA) [Streptococcus thermophilus strain 24740]
MEMKQINETTLKIMITMEDLEEHGMELKDFLIPQEKTEEFFYTVMDELDLPDNFKNSGMLSFRVTPRKDRVDVFVTKSDL
KEALDFNDLSDMEDYSGLSPEEFLKALEDNFMDKGDIEAHHKLEEHDKTLKEVDETMTEPAKEVAEETIHEDYTHYVLAF
SDFDQVVTFAQGLKNVSVEGSEFYKLGDVYYMTILLYLADEPDYYANNMYARFLEYANVADRTRPYLQEHATILMEEDAL
PVLQATKWS

Nucleotide


Download         Length: 750 bp        

>NTDB_id=479510 IBC04_RS00975 WP_207560003.1 171669..172418(+) (mecA) [Streptococcus thermophilus strain 24740]
ATGGAAATGAAACAAATAAACGAGACAACTCTAAAAATCATGATTACCATGGAAGATCTTGAAGAACATGGTATGGAGCT
GAAAGATTTCTTGATTCCCCAGGAAAAAACAGAGGAATTTTTCTATACTGTCATGGATGAGTTGGACTTGCCTGATAACT
TTAAAAATAGTGGGATGTTGAGCTTCCGTGTCACGCCACGAAAGGATCGTGTGGATGTTTTTGTGACTAAATCAGATCTT
AAGGAAGCCCTTGATTTTAATGATTTGTCAGATATGGAAGACTATTCAGGACTTTCTCCAGAAGAATTCCTCAAAGCTCT
TGAAGATAACTTTATGGATAAGGGAGATATTGAAGCCCACCATAAGCTCGAAGAGCATGATAAGACCTTGAAAGAGGTTG
ATGAGACTATGACAGAGCCGGCTAAGGAAGTGGCTGAGGAAACTATTCATGAAGATTATACTCACTATGTCTTGGCTTTC
TCTGACTTTGATCAAGTAGTGACCTTTGCGCAAGGTTTGAAGAATGTGTCAGTGGAGGGTTCTGAATTTTATAAACTTGG
TGATGTCTACTATATGACTATCCTTCTTTACTTGGCTGATGAGCCTGATTATTACGCGAACAATATGTATGCGCGTTTTC
TTGAATATGCGAATGTGGCAGACCGAACACGTCCCTATCTACAAGAGCATGCAACAATCTTGATGGAAGAGGACGCCTTA
CCGGTATTACAAGCAACGAAATGGAGCTAG

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-242)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Streptococcus thermophilus LMG 18311

99.598

100

0.996
  mecA Streptococcus thermophilus LMD-9

98.795

100

0.988
  mecA Streptococcus mutans UA159

57.377

97.992

0.562
  mecA Streptococcus pneumoniae Rx1

46.185

100

0.462
  mecA Streptococcus pneumoniae D39

46.185

100

0.462
  mecA Streptococcus pneumoniae R6

46.185

100

0.462
  mecA Streptococcus pneumoniae TIGR4

46.185

100

0.462