Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   H7787_RS08995 Genome accession   NZ_CP060648
Coordinates   1807335..1808558 (+) Length   407 a.a.
NCBI ID   WP_002994926.1    Uniprot ID   A0A4U9TAA9
Organism   Streptococcus pyogenes strain TSPY383     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1802335..1813558
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7787_RS08980 (H7787_08945) - 1805485..1806249 (-) 765 Protein_1744 IS30 family transposase -
  H7787_RS08990 (H7787_08955) rlmH 1806644..1807123 (-) 480 WP_002981964.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  H7787_RS08995 (H7787_08960) htrA 1807335..1808558 (+) 1224 WP_002994926.1 S1C family serine protease Regulator
  H7787_RS09000 (H7787_08965) spo0J 1808647..1809423 (+) 777 WP_014407987.1 ParB/RepB/Spo0J family partition protein Regulator
  H7787_RS09005 (H7787_08970) dnaA 1809656..1811011 (+) 1356 WP_002987659.1 chromosomal replication initiator protein DnaA -
  H7787_RS09010 (H7787_08975) dnaN 1811166..1812302 (+) 1137 WP_010921762.1 DNA polymerase III subunit beta -
  H7787_RS09015 (H7787_08980) - 1812377..1812574 (+) 198 WP_002981933.1 DUF951 domain-containing protein -

Sequence


Protein


Download         Length: 407 a.a.        Molecular weight: 42760.38 Da        Isoelectric Point: 7.3920

>NTDB_id=477496 H7787_RS08995 WP_002994926.1 1807335..1808558(+) (htrA) [Streptococcus pyogenes strain TSPY383]
MPSMKHILKSLSILLIGFLGGLIAIITFNNLYPHSPSKINSGKATTSNMVFNNTTNTTKAVKAVQNAVVSVINYQDNPSS
SLSNPYTKLFGEGRSKENKDAELSIFSEGSGVIYRKDGNSAYVVTNNHVIDGAKRIEILMADGSKVVGELVGADTYSDLA
VVKISSDKIKTVAEFADSTKLNVGEVAIAIGSPLGTQYANSVTQGIVSSLSRTVTLKNENGETVSTNAIQTDAAINPGNS
GGPLINIEGQVIGINSSKISSTPTGSNGNSGAVEGIGFAIPSTDVIKIIKQLETNGEVIRPALGISMVNLNDLSTNALSQ
INIPTSVTGGIVVAEVKEGMPASGKLAQYDVITEIDGKTVNSISDLQSSLYGHDINDTIKVTFYRGTTKKKADIKLTKTT
QDLTKTQ

Nucleotide


Download         Length: 1224 bp        

>NTDB_id=477496 H7787_RS08995 WP_002994926.1 1807335..1808558(+) (htrA) [Streptococcus pyogenes strain TSPY383]
ATGCCAAGTATGAAACATATCTTAAAATCCTTAAGTATTTTACTAATTGGATTTTTAGGAGGATTAATAGCAATTATTAC
ATTCAATAATCTCTACCCACATTCTCCATCAAAAATAAATTCAGGTAAGGCAACAACTAGTAATATGGTTTTTAACAACA
CAACCAATACTACTAAAGCTGTCAAAGCTGTTCAAAATGCAGTTGTATCAGTTATTAATTATCAAGATAACCCTTCTTCA
TCCCTTTCTAACCCTTATACAAAACTCTTTGGAGAAGGGCGTTCAAAAGAGAATAAGGATGCTGAATTATCTATTTTTAG
TGAAGGATCTGGGGTCATTTATCGAAAAGATGGCAACTCCGCTTACGTTGTTACTAATAACCATGTTATCGACGGAGCTA
AACGAATTGAAATTCTTATGGCAGACGGATCTAAAGTTGTTGGTGAATTAGTTGGAGCTGATACTTATTCGGATTTAGCT
GTTGTTAAGATCTCTTCAGATAAGATAAAAACAGTAGCTGAATTTGCAGATTCTACAAAACTAAATGTTGGAGAAGTTGC
TATTGCTATCGGCAGCCCACTAGGAACACAATACGCTAATTCTGTTACTCAAGGAATCGTCTCTAGTTTAAGTCGTACTG
TAACTTTAAAAAACGAGAATGGTGAGACTGTCTCAACAAATGCTATTCAGACAGATGCTGCTATTAACCCTGGAAACTCT
GGTGGACCACTAATTAATATTGAGGGGCAAGTAATCGGAATTAATTCAAGTAAAATTTCTTCTACCCCAACTGGTAGCAA
CGGTAATAGTGGTGCTGTTGAAGGAATTGGTTTTGCTATCCCATCTACTGATGTTATTAAAATTATTAAACAACTAGAAA
CTAATGGTGAAGTTATCAGACCTGCTCTTGGAATATCCATGGTCAATTTAAATGACTTATCCACAAATGCTCTTAGTCAA
ATTAATATTCCAACTAGTGTAACTGGTGGTATTGTAGTAGCAGAAGTTAAGGAAGGAATGCCGGCATCTGGCAAACTTGC
TCAGTACGATGTGATTACAGAAATTGATGGCAAAACAGTTAATTCAATTAGTGATTTACAAAGTAGTCTATACGGACACG
ATATTAATGATACTATTAAAGTAACTTTTTATAGAGGAACTACAAAGAAAAAAGCAGATATCAAATTAACAAAAACTACT
CAAGATTTGACTAAAACGCAGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A4U9TAA9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

61.881

99.263

0.614

  htrA Streptococcus gordonii str. Challis substr. CH1

55.224

98.771

0.545

  htrA Streptococcus mitis NCTC 12261

53.071

100

0.531

  htrA Streptococcus pneumoniae Rx1

52.826

100

0.528

  htrA Streptococcus pneumoniae D39

52.826

100

0.528

  htrA Streptococcus pneumoniae R6

52.826

100

0.528

  htrA Streptococcus pneumoniae TIGR4

52.826

100

0.528