Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   JZY07_RS09790 Genome accession   NZ_CP071305
Coordinates   1974379..1975101 (-) Length   240 a.a.
NCBI ID   WP_002938171.1    Uniprot ID   -
Organism   Streptococcus suis strain SC183     
Function   degradation of ComW (predicted from homology)   
Competence regulation

Genomic Context

Location: 1969379..1980101
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JZY07_RS09770 (JZY07_09770) - 1969451..1970674 (-) 1224 WP_024412046.1 cysteine desulfurase -
  JZY07_RS09775 (JZY07_09775) sufD 1970678..1971940 (-) 1263 WP_024400172.1 Fe-S cluster assembly protein SufD -
  JZY07_RS09780 (JZY07_09780) sufC 1971957..1972730 (-) 774 WP_024400173.1 Fe-S cluster assembly ATPase SufC -
  JZY07_RS09785 (JZY07_09785) - 1973210..1974382 (-) 1173 WP_002938168.1 MraY family glycosyltransferase -
  JZY07_RS09790 (JZY07_09790) mecA 1974379..1975101 (-) 723 WP_002938171.1 adaptor protein MecA Regulator
  JZY07_RS09795 (JZY07_09795) - 1975229..1976064 (-) 836 Protein_1908 undecaprenyl-diphosphate phosphatase -
  JZY07_RS09800 (JZY07_09800) - 1976190..1977755 (+) 1566 WP_024412047.1 ABC transporter substrate-binding protein/permease -
  JZY07_RS09805 (JZY07_09805) - 1977748..1978491 (+) 744 WP_012775335.1 amino acid ABC transporter ATP-binding protein -
  JZY07_RS09810 (JZY07_09810) - 1978613..1978822 (-) 210 WP_009910800.1 hypothetical protein -
  JZY07_RS09815 (JZY07_09815) - 1978908..1979810 (-) 903 WP_002937414.1 SPFH domain-containing protein -

Sequence

Protein


Download         Length: 240 a.a.        Molecular weight: 27973.51 Da        Isoelectric Point: 4.0497

>NTDB_id=476722 JZY07_RS09790 WP_002938171.1 1974379..1975101(-) (mecA) [Streptococcus suis strain SC183]
MKVKQISDSTLKITIKLDDLEERGMELSDFLIPQEKTEEFFYTVLDELDLPMTFRESGMLSFRVTPKPDRVDIFVTKSDL
DQSLNFDEFTDLSELGDVASMTPDEFFKSLEQTVREKSAPDATAVRHLEEVEQEEEADEEEQERYIYYILEFPTIEDLFT
FVGTVDYPVEESELYKMDGHYYLTVLINVENRSKQYPGYILSRMLEFTNDTKLTRPALQEHGTLMLPLAAIEELRKVPTV

Nucleotide


Download         Length: 723 bp        

>NTDB_id=476722 JZY07_RS09790 WP_002938171.1 1974379..1975101(-) (mecA) [Streptococcus suis strain SC183]
ATGAAAGTAAAGCAAATTAGTGATTCAACCTTGAAAATCACTATAAAATTAGATGATTTGGAAGAGAGAGGAATGGAACT
TTCGGACTTTCTCATTCCGCAAGAAAAGACAGAGGAGTTCTTTTACACTGTTTTGGATGAATTGGATTTACCAATGACTT
TCCGAGAAAGCGGTATGCTGAGTTTTCGTGTGACTCCGAAGCCAGATCGGGTGGACATATTTGTTACCAAATCTGATTTG
GATCAGAGCTTGAATTTCGATGAATTTACAGATTTGTCGGAACTTGGGGATGTCGCAAGTATGACTCCAGATGAGTTTTT
CAAGAGTTTGGAGCAAACCGTTCGTGAGAAAAGCGCACCGGATGCAACAGCCGTTCGTCATTTGGAAGAGGTAGAGCAAG
AGGAAGAAGCAGATGAAGAGGAGCAGGAGCGCTATATTTACTATATTTTGGAATTTCCAACGATAGAGGATCTGTTTACT
TTTGTTGGTACGGTTGATTATCCAGTAGAAGAATCGGAATTATATAAAATGGATGGTCACTACTACTTGACAGTTCTTAT
CAATGTAGAAAATCGTTCCAAGCAGTATCCAGGCTACATTCTCTCAAGAATGTTGGAATTTACCAATGATACTAAGTTGA
CCAGACCTGCTTTACAAGAACACGGAACTTTGATGCTTCCGCTTGCGGCAATTGAGGAGCTTAGGAAGGTTCCGACAGTA
TGA

Domains

Predicted by InterProScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-234)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Streptococcus pneumoniae Rx1

51.639

100

0.525
  mecA Streptococcus pneumoniae D39

51.639

100

0.525
  mecA Streptococcus pneumoniae R6

51.639

100

0.525
  mecA Streptococcus pneumoniae TIGR4

51.639

100

0.525
  mecA Streptococcus mutans UA159

50

100

0.508
  mecA Streptococcus thermophilus LMD-9

47.5

100

0.475
  mecA Streptococcus thermophilus LMG 18311

47.083

100

0.471