Detailed information    

insolico Bioinformatically predicted

Overview

Name   htrA   Type   Regulator
Locus tag   HUG14_RS02965 Genome accession   NZ_CP060580
Coordinates   598280..599506 (+) Length   408 a.a.
NCBI ID   WP_187398485.1    Uniprot ID   -
Organism   Lactococcus lactis strain K_LL005     
Function   repress competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 593280..604506
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HUG14_RS02940 (HUG14_02940) - 594371..595174 (-) 804 WP_003130590.1 phosphatidate cytidylyltransferase -
  HUG14_RS02945 (HUG14_02945) - 595174..595908 (-) 735 WP_003130589.1 isoprenyl transferase -
  HUG14_RS02950 (HUG14_02950) yajC 596281..596613 (-) 333 WP_003130588.1 preprotein translocase subunit YajC -
  HUG14_RS02955 (HUG14_02955) - 596708..597406 (-) 699 WP_033900689.1 DNA alkylation repair protein -
  HUG14_RS02960 (HUG14_02960) rlmH 597425..597904 (-) 480 WP_187398484.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  HUG14_RS02965 (HUG14_02965) htrA 598280..599506 (+) 1227 WP_187398485.1 S1C family serine protease Regulator
  HUG14_RS02970 (HUG14_02970) - 599632..600630 (+) 999 WP_023189027.1 glycosyltransferase family 4 protein -
  HUG14_RS02975 (HUG14_02975) - 600756..602096 (+) 1341 WP_010906331.1 glycosyltransferase family 4 protein -
  HUG14_RS02980 (HUG14_02980) - 602204..602428 (+) 225 WP_003130579.1 YkuJ family protein -
  HUG14_RS02985 (HUG14_02985) - 602570..603574 (+) 1005 WP_058206476.1 hypothetical protein -
  HUG14_RS02990 (HUG14_02990) - 603615..604367 (-) 753 WP_010906333.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -

Sequence

Protein


Download         Length: 408 a.a.        Molecular weight: 41621.98 Da        Isoelectric Point: 5.1429

>NTDB_id=476646 HUG14_RS02965 WP_187398485.1 598280..599506(+) (htrA) [Lactococcus lactis strain K_LL005]
MAKANIGKLLLTGVVGGAIALGGSAIYQSTTNQSANNSRSNTTSTKVSNVSVNVNTDVTSAIKKVSNSVVSVMNYQKVNS
QSSDFSSIFGGNSGSSSSTDGLQLSSEGSGVIYKKSGGDAYVVTNYHVIAGNSSLDVLLSGGQKVKASVVGYDEYTDLAV
LKISSEHVKDVATFADSSKLTIGEPAIAVGSPLGSQFANTATEGILSATSRQVTLTQENGQTTNINAIQTDAAINPGNSG
GALINIEGQVIGITQSKITTTEDGSTSVEGLGFAIPSNDVVNIINKLEADGKISRPALGIRMVDLSQLSTNDSSQLKLPS
SVTGGVVVYSVQSGLPAASAGLKAGDVITKVGDTAVTSSTDLQSALYSHNINDTVKVTYYRDGKSNTADVKLSKSTSDLE
TSSSSSSN

Nucleotide


Download         Length: 1227 bp        

>NTDB_id=476646 HUG14_RS02965 WP_187398485.1 598280..599506(+) (htrA) [Lactococcus lactis strain K_LL005]
ATGGCAAAAGCTAATATAGGAAAATTGCTATTAACAGGTGTCGTGGGCGGAGCCATCGCACTTGGAGGAAGTGCAATCTA
TCAAAGCACTACAAATCAATCGGCAAATAATAGTCGTTCAAATACAACTAGTACAAAGGTTAGTAACGTTTCGGTAAATG
TCAATACCGATGTTACCTCTGCAATTAAAAAAGTTTCAAATTCTGTCGTTTCTGTTATGAATTATCAAAAAGTTAACTCA
CAAAGTAGTGACTTCAGTTCAATTTTTGGTGGAAATAGCGGTTCAAGTTCATCGACTGATGGCTTACAGCTTTCTAGTGA
AGGCTCTGGTGTCATCTACAAAAAATCTGGTGGTGATGCCTACGTTGTAACTAACTACCACGTTATTGCTGGTAATAGCT
CACTTGATGTTCTGCTTTCTGGTGGACAAAAAGTCAAAGCTTCTGTGGTTGGTTATGATGAATACACAGACCTTGCTGTT
CTTAAAATCAGTTCTGAACATGTCAAAGATGTGGCGACATTCGCTGATTCTAGTAAATTAACAATTGGTGAACCTGCCAT
TGCCGTTGGCTCACCTTTAGGTAGTCAATTTGCTAACACCGCAACTGAAGGAATTTTATCTGCAACAAGCCGTCAAGTGA
CTTTGACCCAAGAAAATGGTCAAACAACTAATATCAATGCAATTCAAACAGATGCTGCCATTAACCCTGGTAACTCTGGA
GGGGCTTTGATTAATATTGAAGGACAAGTTATTGGAATTACTCAAAGTAAAATTACAACAACTGAAGATGGTTCTACTTC
TGTCGAAGGTTTAGGATTTGCGATTCCTTCTAATGATGTCGTAAATATCATTAATAAACTTGAAGCTGATGGTAAGATTT
CACGCCCTGCTTTAGGTATCCGAATGGTTGACCTTTCACAATTATCAACAAATGACAGTTCTCAATTGAAATTACCAAGC
AGTGTAACAGGTGGGGTTGTTGTTTACTCCGTCCAATCTGGACTTCCTGCTGCCTCAGCTGGTTTGAAAGCTGGAGATGT
AATTACAAAGGTTGGCGATACAGCAGTAACTTCTTCAACAGACTTGCAAAGTGCTCTTTACTCACACAATATCAATGATA
CAGTAAAAGTTACTTATTATCGTGATGGTAAATCAAATACAGCAGATGTTAAACTTTCTAAATCAACCAGTGACTTAGAA
ACAAGCAGTTCATCTTCTTCTAATTAA

Domains

Predicted by InterproScan.

PDZ domain (PDZ_2)

(296-392)

Peptidase family M50 (Peptidase_M50)

(260-396)

Trypsin-like peptidase domain (Trypsin_2)

(108-253)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mitis NCTC 12261

56.806

93.627

0.532
  htrA Streptococcus gordonii str. Challis substr. CH1

54.476

95.833

0.522
  htrA Streptococcus pneumoniae D39

58.892

84.069

0.495
  htrA Streptococcus pneumoniae TIGR4

58.892

84.069

0.495
  htrA Streptococcus pneumoniae R6

58.892

84.069

0.495
  htrA Streptococcus pneumoniae Rx1

58.892

84.069

0.495
  htrA Streptococcus mutans UA159

52.989

90.196

0.478