Detailed information NTG0475797

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: H8N02_RS01225
• Genome accession: NZ_CP060413
• Coordinates: 251332..252867 (+)
• Length: 511 a.a.
• NCBI ID: WP_054067955.1
• Uniprot ID: -
• Organism: Comamonas kerstersii strain 3132976
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 246332..257867

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H8N02_RS01205 (H8N02_01205)	-	247317..248081 (-)	765	WP_210606978.1	YoaK family protein	-
H8N02_RS01210 (H8N02_01210)	glcE	248093..249220 (-)	1128	WP_210606979.1	glycolate oxidase subunit GlcE	-
H8N02_RS01215 (H8N02_01215)	-	249405..250757 (-)	1353	WP_210606980.1	ammonium transporter	-
H8N02_RS01220 (H8N02_01220)	-	250784..251122 (-)	339	WP_077345382.1	P-II family nitrogen regulator	-
H8N02_RS01225 (H8N02_01225)	comM	251332..252867 (+)	1536	WP_054067955.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
H8N02_RS01230 (H8N02_01230)	-	252855..253745 (-)	891	WP_054067985.1	LysR family transcriptional regulator	-
H8N02_RS01235 (H8N02_01235)	-	253842..255029 (+)	1188	WP_151044482.1	YbfB/YjiJ family MFS transporter	-
H8N02_RS01240 (H8N02_01240)	-	255071..255670 (+)	600	WP_054067984.1	glutathione S-transferase N-terminal domain-containing protein	-
H8N02_RS01245 (H8N02_01245)	-	255804..256538 (-)	735	WP_210606981.1	ABC transporter ATP-binding protein	-
H8N02_RS01250 (H8N02_01250)	-	256535..257299 (-)	765	WP_210606982.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 511 a.a.
• Molecular weight: 54674.61 Da
• Isoelectric Point: 8.2000

>NTDB_id=475797 H8N02_RS01225 WP_054067955.1 251332..252867(+) (comM) [Comamonas kerstersii strain 3132976]
MSLACVQSRALMGLQAPQVTVEVHLANGLPALNLVGLADLEVREARERVRCAIANSGLEYPGNKRITVNLAPADLPKDSG
RFDLPIALGILAASGQIDARKLQGWEFAGELSLSGELRPVRGALATALAMGTQEPPLRFVLPTESAREAAWATQIEVYGA
QHLLDVVQQLLPDSARDAPPSTGWQRMQPQAAQHVPDMLDMADVKGQLQARRALEIAAAGAHGLLLVGPPGSGKSMLAQR
FAGLLPPMTSTEALESAAIASLGGRFAPERWGQRPTGSPHHTASAVALVGGGSPPKPGEISYAHHGVLFLDEFPEFSRSA
LEALREPLETGRITIARAAHSTTFPARFQLIAAMNPCPCGFWGSTQRSCRCTPEQVARYQAKLSGPLLDRIDLHVEVPAL
PAQELLAQTAGEPSAAIRARVLQARERALQRQQCPNQMLQGEALDQHVQLDAAATELLRKAADKLGWSARATHRALRVAR
TIADLAGSERIASAHVAEAMQYRRALLRQTG

Nucleotide

• Length: 1536 bp

>NTDB_id=475797 H8N02_RS01225 WP_054067955.1 251332..252867(+) (comM) [Comamonas kerstersii strain 3132976]
ATGTCTCTGGCGTGTGTACAAAGCCGCGCCTTGATGGGTCTGCAGGCCCCGCAGGTCACTGTGGAAGTGCATCTGGCCAA
TGGATTGCCAGCCCTCAACCTGGTCGGCCTGGCCGATCTGGAAGTGCGCGAAGCCCGAGAGCGCGTGCGCTGTGCGATTG
CCAACAGCGGCCTGGAATACCCCGGCAACAAGCGCATCACGGTGAACCTGGCCCCCGCCGACCTACCCAAGGATTCCGGC
CGCTTTGACCTGCCGATTGCGCTGGGCATCCTTGCCGCCAGCGGCCAGATTGATGCACGCAAGCTCCAGGGCTGGGAATT
TGCCGGAGAGCTGTCGCTGTCCGGCGAGCTGCGCCCGGTGCGCGGCGCGCTGGCTACGGCACTGGCCATGGGCACGCAGG
AACCACCGCTGCGCTTTGTGCTGCCCACGGAGAGTGCGCGCGAAGCCGCCTGGGCCACGCAGATCGAGGTCTATGGTGCA
CAGCATTTGCTCGATGTGGTGCAGCAATTGCTGCCAGACAGCGCAAGGGACGCACCACCGTCCACCGGCTGGCAACGTAT
GCAGCCGCAGGCTGCCCAGCATGTGCCGGACATGCTGGACATGGCCGATGTCAAAGGCCAGCTGCAGGCCCGACGCGCGC
TGGAAATTGCCGCCGCTGGCGCGCACGGCCTGCTGCTGGTGGGCCCGCCTGGCAGTGGCAAATCCATGCTGGCGCAGCGC
TTTGCCGGACTGCTGCCGCCCATGACGTCTACCGAAGCACTGGAGAGCGCAGCCATTGCCAGTCTGGGCGGACGATTTGC
CCCTGAGCGCTGGGGCCAGCGCCCCACGGGCAGCCCGCACCATACGGCCAGTGCCGTGGCACTGGTCGGTGGTGGCTCAC
CGCCCAAGCCTGGCGAGATTTCCTATGCCCACCACGGCGTGCTGTTTCTGGATGAGTTTCCCGAGTTCAGCCGCAGCGCA
CTCGAAGCCCTGCGCGAGCCGCTGGAGACCGGGCGCATCACCATTGCCCGTGCGGCCCACAGCACCACCTTCCCCGCCCG
CTTTCAATTGATTGCGGCCATGAACCCCTGCCCCTGTGGCTTCTGGGGCAGCACGCAGCGCAGCTGCCGCTGCACGCCCG
AGCAGGTGGCACGTTATCAGGCCAAGCTCAGCGGCCCATTGCTCGACCGCATTGATCTGCATGTGGAAGTGCCTGCCCTG
CCTGCACAGGAGCTGCTGGCCCAGACTGCGGGTGAACCCAGCGCTGCCATCCGCGCCCGGGTGCTGCAGGCGCGTGAGCG
TGCGCTGCAGCGCCAGCAATGCCCCAACCAGATGCTGCAGGGCGAAGCGCTGGACCAGCATGTGCAGCTCGATGCCGCCG
CCACCGAGCTGCTGCGCAAGGCGGCGGACAAACTGGGGTGGAGTGCCCGCGCCACCCACCGCGCGCTGCGTGTGGCGCGC
ACGATTGCGGATCTGGCAGGCAGTGAACGCATTGCCAGCGCCCATGTGGCCGAAGCCATGCAGTACCGCCGGGCACTGCT
GCGTCAGACGGGCTGA

Domains

Predicted by InterproScan.

• Subunit ChlI of Mg-chelatase (ChlI) (21-143)

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (411-503)

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (200-404)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Vibrio cholerae strain A1552	51.485	98.826	0.509
comM	Haemophilus influenzae Rd KW20	50.984	99.413	0.507
comM	Glaesserella parasuis strain SC1401	50.296	99.217	0.499
comM	Legionella pneumophila strain ERS1305867	48.155	100	0.485
comM	Legionella pneumophila str. Paris	48.155	100	0.485
comM	Vibrio campbellii strain DS40M4	48.911	98.826	0.483
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	44.379	99.217	0.44