Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | G7042_RS22310 | Genome accession | NZ_CP060030 |
| Coordinates | 4688374..4688694 (-) | Length | 106 a.a. |
| NCBI ID | WP_005318073.1 | Uniprot ID | A4SJ96 |
| Organism | Aeromonas salmonicida subsp. masoucida strain BR19001YR | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 4683374..4693694
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G7042_RS22290 (G7042_22275) | - | 4683658..4684356 (-) | 699 | WP_005318084.1 | DnaT-like ssDNA-binding domain-containing protein | - |
| G7042_RS22295 (G7042_22280) | - | 4684710..4685681 (+) | 972 | WP_011898383.1 | response regulator | - |
| G7042_RS22300 (G7042_22285) | - | 4685757..4687154 (-) | 1398 | WP_017412884.1 | peptide MFS transporter | - |
| G7042_RS22305 (G7042_22290) | galU | 4687368..4688279 (-) | 912 | WP_005318075.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| G7042_RS22310 (G7042_22295) | comEA | 4688374..4688694 (-) | 321 | WP_005318073.1 | ComEA family DNA-binding protein | Machinery gene |
| G7042_RS22315 (G7042_22300) | cysQ | 4688862..4689632 (+) | 771 | WP_005318069.1 | 3'(2'),5'-bisphosphate nucleotidase CysQ | - |
| G7042_RS22320 (G7042_22305) | - | 4689714..4690010 (-) | 297 | WP_005318066.1 | YciI family protein | - |
| G7042_RS22325 (G7042_22310) | - | 4690037..4690588 (-) | 552 | WP_005318063.1 | septation protein A | - |
| G7042_RS22330 (G7042_22315) | - | 4690674..4692209 (-) | 1536 | WP_034283547.1 | pyridoxal-dependent decarboxylase | - |
| G7042_RS22335 (G7042_22320) | - | 4692434..4693069 (+) | 636 | WP_017412882.1 | hemolysin III family protein | - |
Sequence
Protein
Download Length: 106 a.a. Molecular weight: 11222.15 Da Isoelectric Point: 10.0215
>NTDB_id=473498 G7042_RS22310 WP_005318073.1 4688374..4688694(-) (comEA) [Aeromonas salmonicida subsp. masoucida strain BR19001YR]
MNYKILTATLLLSCLPLLSQPLLAADKPAAKPATTVTTAKESGKVNLNTASINELTALKGIGEKKAQAIVDFRQKQGKFT
TVEQLADVSGIGPATLEANRDMIIVK
MNYKILTATLLLSCLPLLSQPLLAADKPAAKPATTVTTAKESGKVNLNTASINELTALKGIGEKKAQAIVDFRQKQGKFT
TVEQLADVSGIGPATLEANRDMIIVK
Nucleotide
Download Length: 321 bp
>NTDB_id=473498 G7042_RS22310 WP_005318073.1 4688374..4688694(-) (comEA) [Aeromonas salmonicida subsp. masoucida strain BR19001YR]
ATGAACTACAAAATCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCCCTGCTCAGCCAGCCTTTGCTGGCCGCCGACAA
GCCGGCTGCCAAGCCAGCGACCACGGTCACCACCGCCAAGGAGAGTGGCAAGGTGAACCTGAATACGGCCAGTATCAATG
AGTTAACTGCCCTCAAGGGGATCGGAGAGAAGAAGGCGCAGGCCATCGTCGATTTTCGTCAGAAACAGGGCAAGTTCACC
ACGGTTGAACAACTGGCGGATGTCAGCGGCATAGGGCCGGCCACTCTGGAAGCAAATCGGGACATGATCATCGTCAAATA
G
ATGAACTACAAAATCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCCCTGCTCAGCCAGCCTTTGCTGGCCGCCGACAA
GCCGGCTGCCAAGCCAGCGACCACGGTCACCACCGCCAAGGAGAGTGGCAAGGTGAACCTGAATACGGCCAGTATCAATG
AGTTAACTGCCCTCAAGGGGATCGGAGAGAAGAAGGCGCAGGCCATCGTCGATTTTCGTCAGAAACAGGGCAAGTTCACC
ACGGTTGAACAACTGGCGGATGTCAGCGGCATAGGGCCGGCCACTCTGGAAGCAAATCGGGACATGATCATCGTCAAATA
G
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae C6706 |
50 |
100 |
0.519 |
| comEA | Vibrio cholerae strain A1552 |
50 |
100 |
0.519 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
46.392 |
91.509 |
0.425 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
42.453 |
100 |
0.425 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
61.905 |
59.434 |
0.368 |