Detailed information NTG0473445

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: H4B47_RS07215
• Genome accession: NZ_CP060029
• Coordinates: 1476372..1477430 (+)
• Length: 352 a.a.
• NCBI ID: WP_031950501.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain AbCTX1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1471372..1482430

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H4B47_RS07200 (H4B47_07220)	-	1472478..1472810 (+)	333	WP_000169604.1	hypothetical protein	-
H4B47_RS07205 (H4B47_07225)	-	1472813..1473637 (+)	825	WP_086223954.1	putative RNA methyltransferase	-
H4B47_RS07210 (H4B47_07230)	ponA	1473655..1476210 (-)	2556	WP_000736677.1	penicillin-binding protein PBP1a	-
H4B47_RS07215 (H4B47_07235)	pilM	1476372..1477430 (+)	1059	WP_031950501.1	pilus assembly protein PilM	Machinery gene
H4B47_RS07220 (H4B47_07240)	pilN	1477430..1478071 (+)	642	WP_000201225.1	PilN domain-containing protein	Machinery gene
H4B47_RS07225 (H4B47_07245)	pilO	1478068..1478808 (+)	741	WP_000076101.1	type 4a pilus biogenesis protein PilO	Machinery gene
H4B47_RS07230 (H4B47_07250)	pilP	1478819..1479346 (+)	528	WP_000695069.1	pilus assembly protein PilP	Machinery gene
H4B47_RS07235 (H4B47_07255)	pilQ	1479409..1481574 (+)	2166	WP_001017033.1	type IV pilus secretin PilQ family protein	Machinery gene
H4B47_RS07240 (H4B47_07260)	aroK	1481586..1482155 (+)	570	WP_000643712.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39014.55 Da
• Isoelectric Point: 4.4618

>NTDB_id=473445 H4B47_RS07215 WP_031950501.1 1476372..1477430(+) (pilM) [Acinetobacter baumannii strain AbCTX1]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTTHAAI
AVPTSTVIHKTIEMDADMSDDEREVQIRVDAEQYIPFPLDEVSLDFEVLPDRLANPNRVNVLLVATRTENVETRVEVLEL
ADLNPKLADVESYAVERAFSVFADSLPIGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
ASRAKKDRSLPDDYEIEVLDPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=473445 H4B47_RS07215 WP_031950501.1 1476372..1477430(+) (pilM) [Acinetobacter baumannii strain AbCTX1]
GTGCTCAGGTTATATCGTAAACCTAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTCAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCCGAAAACAGTGTAGTTGAAAAAAATA
TCTTAAATCCAGAAGCAGTTGCAGAGGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCACTCATGCTGCAATT
GCGGTTCCGACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAGCGATGACGAACGCGAAGTTCAGAT
TCGTGTAGATGCGGAGCAGTATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTTTGAGGTTTTGCCCGATCGTCTTG
CGAATCCAAATCGTGTAAATGTGCTCTTGGTCGCCACAAGAACAGAAAACGTTGAAACCCGCGTTGAAGTGCTTGAATTG
GCAGATTTAAATCCTAAATTGGCTGATGTCGAAAGTTACGCGGTTGAGCGCGCTTTTAGCGTGTTTGCTGATAGCTTACC
GATAGGTGCAAATACCATAGGGATTTTAGATATCGGCCATACCATGACGACATTATCTGTCATGCAAAATGGCAAGATTA
TTTATACACGAGAGCAGGTTTTTGGCGGAAAACAACTTACGCTTGAAATTCAAAGTCGTTATGGTTTGTCTTTAGAAGAA
GCAAGCCGAGCGAAAAAAGATCGCTCTTTACCAGATGATTATGAAATTGAAGTGCTAGACCCATTTCTAGATGCGGTAGT
TCAGCAGGCGGCCCGCTCACTACAATTTTTCTTTTCCTCATCCCAATTTAACGAAATAGACCATATTTTGCTCGCTGGTG
GAAATGCGAATATTCCAGGCCTTGCCAAGCTTTTGCAGCAAAAATTAGGTTACCGTGTCACGATTGCCAACCCGTTTTTA
CAAATGGGCTTTTCTCCTCAAGTCGACGTTCAAAAAATTGAAAATGATGCTTCATCTTTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	99.716	100	0.997
comM	Acinetobacter nosocomialis M2	98.864	100	0.989
comM	Acinetobacter baylyi ADP1	81.25	100	0.813
pilM	Legionella pneumophila strain ERS1305867	42.09	100	0.423