Detailed information NTG0472183

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: H2O77_RS00355
• Genome accession: NZ_CP059843
• Coordinates: 78660..80204 (+)
• Length: 514 a.a.
• NCBI ID: WP_131431108.1
• Uniprot ID: -
• Organism: Cobetia sp. 4B
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 73660..85204

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H2O77_RS00330 (H2O77_00330)	glnK	74205..74543 (-)	339	WP_024951507.1	P-II family nitrogen regulator	-
H2O77_RS00335 (H2O77_00335)	-	74693..75940 (-)	1248	WP_043331583.1	ammonium transporter	-
H2O77_RS00340 (H2O77_00340)	-	75972..76310 (-)	339	WP_043331582.1	P-II family nitrogen regulator	-
H2O77_RS00345 (H2O77_00345)	-	76748..77122 (+)	375	WP_215823673.1	accessory factor UbiK family protein	-
H2O77_RS00350 (H2O77_00350)	-	77217..77495 (-)	279	WP_043331581.1	hypothetical protein	-
H2O77_RS00355 (H2O77_00355)	comM	78660..80204 (+)	1545	WP_131431108.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
H2O77_RS00360 (H2O77_00360)	-	80238..81323 (-)	1086	WP_215823674.1	DUF4105 domain-containing protein	-
H2O77_RS00365 (H2O77_00365)	-	81348..82499 (-)	1152	WP_215823675.1	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	-
H2O77_RS00370 (H2O77_00370)	-	82598..83125 (-)	528	WP_215823676.1	hypothetical protein	-
H2O77_RS00375 (H2O77_00375)	-	83122..84060 (-)	939	WP_240548769.1	alpha/beta hydrolase	-

Sequence

Protein

• Length: 514 a.a.
• Molecular weight: 54908.27 Da
• Isoelectric Point: 7.4753

>NTDB_id=472183 H2O77_RS00355 WP_131431108.1 78660..80204(+) (comM) [Cobetia sp. 4B]
MSLAMLRTRASLGLEAPEVQVEVHLSNGLPGLSIVGLPEAAVKESRERVRSALLNAGFEFPARRITLNLAPADLPKEGGR
FDLPIALGILVASGQIPEEAVAAMECLGELALDGSIRAVTGVLPAALCCRKAGRTLVVPRGNADEAALAEELEVLAVGHL
LELVAHLLGRERLTPHVCSIIPQARLPEPDLSEVRGQHQARRALEIAAAGGHNLLFAGPPGTGKTMLASRLSGILPPLGE
GEALEVAAVRSVCGLPIMERWGQRPFRAPHHTASGVALVGGGSKPRPGEVSLAHHGVLFLDELAEFDRGVLEVMREPLES
GRILISRASHQRRFPARFQLVAAMNPCPCGYLGDSRRNCSCTPAQIQRYQARLSGPLLDRIDLQVEVPGLPAEELTSATP
GEASAGVRERVLAARARQLARGGLNAHLDTHALEAACQLEDGERQWLAGVLSRLNLSARAYHRVLRVALTLSDLIDQDGV
QRPQLMEAIGYRQLDRMMGRDPARPGAGAQQRSA

Nucleotide

• Length: 1545 bp

>NTDB_id=472183 H2O77_RS00355 WP_131431108.1 78660..80204(+) (comM) [Cobetia sp. 4B]
ATGTCATTGGCAATGTTGCGCACGCGCGCGTCACTTGGTCTCGAGGCACCGGAAGTTCAGGTGGAGGTACACCTTTCCAA
CGGCTTGCCGGGGCTGTCCATCGTCGGCTTGCCGGAAGCGGCGGTGAAGGAGAGCCGCGAGCGGGTGCGCAGTGCGCTGC
TCAATGCCGGGTTCGAGTTTCCGGCGCGACGCATCACTCTCAATCTGGCGCCAGCGGACCTCCCCAAGGAAGGCGGACGC
TTCGATCTGCCCATCGCGCTGGGGATTCTGGTCGCCTCAGGGCAGATACCGGAAGAGGCCGTGGCAGCGATGGAGTGCCT
CGGCGAGCTGGCGCTGGATGGCAGCATCCGTGCCGTGACCGGCGTGCTGCCAGCCGCACTCTGCTGTCGCAAGGCGGGGC
GGACGCTGGTGGTGCCGCGCGGCAATGCCGACGAGGCGGCACTCGCCGAGGAGTTGGAAGTACTGGCGGTGGGCCATCTG
CTGGAGCTGGTGGCTCACCTGCTGGGGCGCGAGCGCCTCACGCCGCATGTGTGTTCGATCATTCCCCAGGCGCGCCTGCC
GGAGCCCGACCTGAGCGAGGTGCGTGGCCAGCATCAGGCACGCAGGGCATTGGAGATCGCCGCGGCCGGCGGCCACAACC
TGCTGTTCGCTGGTCCGCCGGGCACCGGCAAGACGATGCTGGCCAGTCGCCTGTCCGGCATCTTGCCGCCATTGGGCGAA
GGTGAGGCGCTGGAAGTCGCGGCGGTGCGTTCGGTATGTGGTCTGCCGATCATGGAGCGCTGGGGTCAGCGGCCTTTCCG
CGCCCCGCACCACACGGCCAGTGGGGTCGCGCTGGTGGGAGGTGGCTCCAAGCCGCGTCCGGGCGAGGTGTCGCTGGCGC
ATCATGGCGTGCTGTTTCTGGATGAGCTGGCGGAGTTCGACCGTGGCGTGCTGGAAGTGATGCGCGAGCCGCTGGAGAGT
GGCCGTATCCTGATCTCGCGCGCCAGCCATCAACGCCGTTTCCCGGCGCGCTTCCAGCTGGTCGCGGCGATGAACCCCTG
CCCCTGTGGCTACCTCGGTGACAGCCGCCGCAATTGCAGCTGCACCCCGGCGCAGATCCAGCGCTATCAGGCGCGTCTGT
CCGGCCCGTTGCTGGACCGCATCGACCTGCAGGTCGAGGTGCCGGGCCTGCCCGCCGAGGAGCTGACGTCCGCCACTCCC
GGCGAGGCCTCGGCCGGCGTGCGCGAACGAGTGCTGGCCGCTCGCGCGCGCCAATTGGCACGCGGCGGCCTGAATGCTCA
TCTGGATACCCACGCGCTGGAAGCCGCCTGTCAGCTGGAAGACGGCGAGCGCCAGTGGCTGGCCGGTGTGCTGTCACGCC
TCAATCTCTCGGCGCGCGCCTATCACCGGGTGCTGCGTGTCGCGCTGACACTGAGTGATCTGATCGACCAGGACGGTGTG
CAGCGGCCGCAGCTGATGGAGGCCATCGGCTATCGCCAGCTGGACCGCATGATGGGCAGGGATCCGGCTCGCCCGGGCGC
CGGTGCCCAGCAGCGCAGCGCCTGA

Domains

Predicted by InterproScan.

• Subunit ChlI of Mg-chelatase (ChlI) (21-142)

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (401-492)

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (190-394)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Vibrio cholerae strain A1552	55.09	97.471	0.537
comM	Vibrio campbellii strain DS40M4	54.781	97.665	0.535
comM	Glaesserella parasuis strain SC1401	53.543	98.833	0.529
comM	Haemophilus influenzae Rd KW20	52.849	99.027	0.523
comM	Legionella pneumophila str. Paris	51.186	98.444	0.504
comM	Legionella pneumophila strain ERS1305867	51.186	98.444	0.504
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	45.968	96.498	0.444