Detailed information NTG0471197

Bioinformatically predicted

Overview

• Name: ctsF
• Type: Machinery gene
• Locus tag: CMOL_RS05785
• Genome accession: NZ_CP059597
• Coordinates: 1140537..1141715 (-)
• Length: 392 a.a.
• NCBI ID: WP_239820087.1
• Uniprot ID: -
• Organism: Campylobacter sp. RM10537
• Function: type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1135537..1146715

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CMOL_RS05760 (CMOL_1141)	-	1137350..1138114 (+)	765	WP_239820082.1	TIGR02757 family protein	-
CMOL_RS05765 (CMOL_1142)	-	1138096..1138860 (+)	765	WP_239820083.1	TSUP family transporter	-
CMOL_RS05770	-	1138974..1139369 (-)	396	WP_239820084.1	hypothetical protein	-
CMOL_RS05775	-	1139579..1140127 (-)	549	WP_239820085.1	hypothetical protein	-
CMOL_RS05780	-	1140073..1140429 (-)	357	WP_239820086.1	glycosyltransferase	-
CMOL_RS05785 (CMOL_1144)	ctsF	1140537..1141715 (-)	1179	WP_239820087.1	type II secretion system F family protein	Machinery gene
CMOL_RS05790 (CMOL_1145)	ctsE	1141702..1143258 (-)	1557	WP_239820088.1	GspE/PulE family protein	Machinery gene
CMOL_RS05795 (CMOL_1146)	ctsX	1143251..1143835 (-)	585	WP_239820089.1	transformation system protein	Machinery gene
CMOL_RS05800 (CMOL_1147)	ctsP	1143832..1144428 (-)	597	WP_239820090.1	ATP-binding protein	Machinery gene
CMOL_RS05805 (CMOL_1148)	ctsD	1144421..1145839 (-)	1419	WP_239820091.1	pilus (MSHA type) biogenesis protein MshL	Machinery gene
CMOL_RS05810 (CMOL_1149)	ctsR	1145817..1146110 (-)	294	WP_200281994.1	transformation system protein	Machinery gene

Sequence

Protein

• Length: 392 a.a.
• Molecular weight: 45791.95 Da
• Isoelectric Point: 9.9166

>NTDB_id=471197 CMOL_RS05785 WP_239820087.1 1140537..1141715(-) (ctsF) [Campylobacter sp. RM10537]
MKLYELEIIKAQKRYKKLIKAENLNTAQAKALDKNWKIISIKEKQKNYVRKINSEYFILFFKELSLLCEAGLSIQEAFKE
LVKIHSFKGINKVLDNLLLGQNLNLAFENANFGLNYAELALIKTAQSTGKLSENFLQIAKLREKSLENKKRFKKAMRYPL
FVFISICAAFIFLMLFVIPNFKDLFENLNINLPLITIIMLQIYDFLQNYVIVFAFLLVFIFIFVYFMYKKSYFFAYICDF
IFLKIPLFSNFIIYSQNYYFFMVFSLLLKNGISLSKAFNLAILGLENKQIISKYKKLLSFIDSGLEITHAFKKIGIFDPL
VLSMLNIAMKSSKLEFLTEEISKYYENKMENLIDKFLILLEPLMTLFVAILVLLLALGIFLPIWELSSGANF

Nucleotide

• Length: 1179 bp

>NTDB_id=471197 CMOL_RS05785 WP_239820087.1 1140537..1141715(-) (ctsF) [Campylobacter sp. RM10537]
ATGAAACTTTATGAGCTTGAAATCATTAAAGCGCAAAAAAGATATAAAAAACTCATCAAGGCTGAAAATTTAAACACTGC
ACAAGCTAAAGCTTTGGATAAAAATTGGAAAATTATTAGCATTAAAGAGAAACAAAAAAATTATGTTAGAAAAATAAATA
GCGAGTATTTTATACTCTTTTTTAAAGAATTATCTTTGCTTTGTGAAGCTGGATTAAGTATACAGGAAGCTTTTAAGGAG
CTTGTAAAAATTCATTCATTTAAAGGTATAAATAAAGTTCTTGATAATTTACTTTTAGGACAAAATTTAAATCTTGCTTT
TGAAAATGCTAATTTTGGACTAAATTATGCAGAATTAGCCCTAATAAAAACGGCACAAAGCACTGGGAAATTGAGTGAAA
ATTTTTTACAAATTGCTAAACTTAGAGAAAAAAGTTTAGAAAATAAAAAGAGATTTAAAAAGGCTATGCGATATCCTTTA
TTTGTTTTTATTAGTATTTGTGCAGCTTTTATTTTTTTGATGCTTTTTGTAATACCTAATTTTAAAGATTTATTTGAAAA
TTTAAATATTAATCTACCTTTAATAACCATTATAATGCTTCAAATTTATGATTTTTTGCAAAATTACGTTATTGTATTTG
CTTTTTTATTGGTATTTATTTTTATCTTTGTTTATTTTATGTATAAAAAATCTTATTTTTTTGCCTATATTTGTGATTTT
ATTTTTTTAAAAATACCTTTATTTTCAAATTTCATTATTTATAGTCAAAATTATTATTTTTTTATGGTTTTTTCTTTACT
TTTAAAAAATGGAATTTCACTTTCTAAAGCTTTTAATTTAGCAATTTTAGGACTTGAAAATAAACAAATTATCTCAAAAT
ACAAAAAACTTCTATCTTTTATAGATTCTGGACTTGAAATCACTCATGCTTTTAAGAAAATAGGCATATTTGATCCTTTG
GTTCTTTCTATGCTCAATATTGCGATGAAAAGTTCAAAACTTGAATTTTTAACTGAGGAAATTTCAAAATATTATGAAAA
TAAAATGGAAAATCTTATAGATAAATTTTTAATTTTACTTGAGCCTTTGATGACCTTATTTGTCGCAATTTTGGTTTTAT
TATTAGCTCTTGGTATTTTTTTGCCGATATGGGAGCTTAGCTCTGGAGCAAATTTTTAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein F (T2SSF) (261-382)

• Type II secretion system (T2SS), protein F (T2SSF) (60-179)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ctsF	Campylobacter jejuni subsp. jejuni 81-176	67.857	100	0.679