Detailed information NTG0047105

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: KHP_RS01745
• Genome accession: NC_017382
• Coordinates: 346598..347398 (+)
• Length: 266 a.a.
• NCBI ID: WP_000840087.1
• Uniprot ID: -
• Organism: Helicobacter pylori 51
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 341598..352398

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KHP_RS01710 (KHP_0320)	pseH	342097..342639 (+)	543	WP_000742645.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
KHP_RS01715 (KHP_0321)	-	342572..343510 (-)	939	WP_000833953.1	tetraacyldisaccharide 4'-kinase	-
KHP_RS01720 (KHP_0322)	-	343507..344289 (-)	783	WP_001168221.1	NAD+ synthase	-
KHP_RS01730 (KHP_0323)	ilvC	344538..345530 (+)	993	WP_001207775.1	ketol-acid reductoisomerase	-
KHP_RS01735 (KHP_0324)	minD	345550..346356 (+)	807	WP_001029123.1	septum site-determining protein MinD	-
KHP_RS01740 (KHP_0325)	minE	346353..346586 (+)	234	WP_000051412.1	cell division topological specificity factor MinE	-
KHP_RS01745 (KHP_0326)	dprA	346598..347398 (+)	801	WP_000840087.1	DNA-processing protein DprA	Machinery gene
KHP_RS01750 (KHP_0327)	dprB	347395..347799 (+)	405	WP_000599227.1	Holliday junction resolvase RuvX	Machinery gene
KHP_RS08485 (KHP_0328)	-	348093..348440 (+)	348	WP_324185890.1	tetratricopeptide repeat protein	-
KHP_RS08490	-	348511..348606 (+)	96	WP_324185892.1	hypothetical protein	-
KHP_RS01760 (KHP_0329)	-	348792..349130 (+)	339	WP_000699911.1	hypothetical protein	-
KHP_RS01765 (KHP_0330)	-	349114..349674 (+)	561	WP_000037123.1	hypothetical protein	-
KHP_RS01770 (KHP_0331)	-	349685..350023 (+)	339	WP_041202009.1	glycoside hydrolase family protein	-
KHP_RS08330	-	350040..350186 (+)	147	WP_180594846.1	hypothetical protein	-
KHP_RS01775 (KHP_0332)	-	350206..350367 (+)	162	WP_001871784.1	hypothetical protein	-
KHP_RS08220	-	350519..350782 (-)	264	WP_195154814.1	hypothetical protein	-
KHP_RS01785 (KHP_0333)	-	350696..351082 (+)	387	Protein_344	DUF1294 domain-containing protein	-
KHP_RS01790 (KHP_0334)	-	351082..351867 (+)	786	WP_000488074.1	hypothetical protein	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29797.72 Da
• Isoelectric Point: 8.8983

>NTDB_id=47105 KHP_RS01745 WP_000840087.1 346598..347398(+) (dprA) [Helicobacter pylori 51]
MKSNFQYSALENIPKAFDILKDPPKKLYCVGDIKLLDAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDFIYPTNNHKVIQEIAQNGLILSEYEKDFMPVKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDHHLKEMPEKKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=47105 KHP_RS01745 WP_000840087.1 346598..347398(+) (dprA) [Helicobacter pylori 51]
ATGAAAAGCAACTTCCAATACAGCGCGCTAGAGAATATCCCTAAAGCCTTTGACATTCTCAAAGACCCCCCTAAAAAGCT
CTATTGCGTGGGCGATATAAAACTTTTAGACGCGCCTTTAAAAGTGGCTATCATCGGCACGAGAAGACCCACCCCTTATA
GCAAGCAACACACCATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGCGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACGATCATGCTTTCGCCTTGCAGTTTGGATTTTATCTATCCCACGAA
CAACCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATACGAAAAGGATTTTATGCCCGTTAAAG
GCTCTTTTTTAGCGAGAAACCGCCTGGTGATCGCTTTAAGCGATGCGGTAATTATCCCCCAAGCGGATTTGAAAAGCGGC
TCTATGAGCAGCGCAAGATTAGCCCAAAAATATCAAAAACCCTTATTTGTTTTGCCCCAGCGCCTGAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACC
ACCATTTAAAGGAAATGCCTGAAAAGAAAGACGAATTTTTAGAATATTGCGCCAAAAACCCGAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGACAAGCTTTTAGAATATGAGCTGTTGGGTAAGATTAAACGCATCAATCATATCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	96.617	100	0.966
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.673	84.962	0.414