Detailed information    

insolico Bioinformatically predicted

Overview

Name   comM   Type   Machinery gene
Locus tag   H3L91_RS06315 Genome accession   NZ_CP059571
Coordinates   1256544..1258034 (-) Length   496 a.a.
NCBI ID   WP_007342791.1    Uniprot ID   F2BDH9
Organism   Neisseria bacilliformis strain DSM 23338     
Function   ssDNA binding (predicted from homology)   
DNA processing

Genomic Context

Location: 1251544..1263034
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H3L91_RS06295 (H3L91_06295) - 1253875..1254354 (-) 480 WP_007342786.1 DUF4124 domain-containing protein -
  H3L91_RS06300 (H3L91_06300) - 1254377..1254577 (-) 201 WP_007342787.1 hypothetical protein -
  H3L91_RS06305 (H3L91_06305) - 1254888..1255583 (-) 696 WP_007342789.1 thiol:disulfide interchange protein DsbA/DsbL -
  H3L91_RS06310 (H3L91_06310) - 1255604..1256431 (-) 828 WP_007342790.1 SPOR domain-containing protein -
  H3L91_RS06315 (H3L91_06315) comM 1256544..1258034 (-) 1491 WP_007342791.1 YifB family Mg chelatase-like AAA ATPase Machinery gene
  H3L91_RS06320 (H3L91_06320) ubiB 1258130..1259641 (-) 1512 WP_007342792.1 ubiquinone biosynthesis regulatory protein kinase UbiB -
  H3L91_RS06325 (H3L91_06325) - 1259851..1260315 (+) 465 WP_040658885.1 DUF5339 family protein -
  H3L91_RS06330 (H3L91_06330) - 1260416..1261999 (+) 1584 WP_007342794.1 tetratricopeptide repeat protein -
  H3L91_RS06335 (H3L91_06335) - 1262546..1262848 (-) 303 WP_007342796.1 hypothetical protein -

Sequence

Protein


Download         Length: 496 a.a.        Molecular weight: 52963.71 Da        Isoelectric Point: 8.1271

>NTDB_id=470866 H3L91_RS06315 WP_007342791.1 1256544..1258034(-) (comM) [Neisseria bacilliformis strain DSM 23338]
MTFAVVHSRALAGANAPPVEVETHLANGLPQFNIVGLPDTEVKESRDRVRAAIIQSGFEFPAKKITVNLAPADLPKESGR
FDLPVALGILAASGQISPEQLPQYEFAGELALSGLLRPIRGGLAMAWQAKQARRAFVMPSENAAQAAVMHGVEAYGADSL
ATVAAHLNGTVPLPRAQAQIRPSENQNLPDLKDVKGQHTARLALEIAAAGGHSLLMMGPPGTGKSMLAQRLPSILPPLTD
DELIEVWTVQSLLPHHTQNFSRSRPCKSPHHSASAVALVGGGSDPRPGEISLAHKGVLFLDELPEFDRKVLEALREPLES
GEIHISRAARQAVFPADFQLVAAMNPCPCGYHGHPSKPCRCTPDAIQRYRSKISGPLIDRIDLVIEVPALPAADLVQAAA
GEPSAAVLERVLAARERQNARQGKLNRALSPTELDTAAGISAEARETLGGILEKLSLSARSFHRIMRTARTIADLSGDDT
VNRSHILRAAALRRAL

Nucleotide


Download         Length: 1491 bp        

>NTDB_id=470866 H3L91_RS06315 WP_007342791.1 1256544..1258034(-) (comM) [Neisseria bacilliformis strain DSM 23338]
ATGACCTTCGCCGTCGTCCACAGCCGCGCCCTCGCCGGCGCAAACGCCCCGCCCGTGGAAGTGGAAACCCATCTGGCCAA
CGGCCTGCCGCAGTTCAACATCGTCGGCCTGCCCGACACCGAAGTGAAGGAAAGCCGCGACCGCGTGCGCGCTGCCATCA
TCCAGAGCGGCTTCGAGTTTCCCGCAAAAAAAATCACCGTCAACCTCGCCCCCGCCGACCTGCCCAAAGAATCCGGCCGC
TTCGACCTGCCCGTCGCCCTCGGCATCCTCGCCGCCTCCGGCCAAATCAGCCCCGAACAACTGCCGCAATACGAATTTGC
CGGCGAACTCGCCCTCTCCGGCCTGCTGCGGCCGATACGCGGCGGGCTGGCGATGGCCTGGCAGGCCAAACAGGCGCGCC
GCGCCTTCGTCATGCCGTCCGAAAACGCCGCCCAGGCCGCCGTGATGCACGGCGTGGAGGCCTACGGCGCGGACAGCCTC
GCCACCGTTGCCGCCCACCTCAACGGCACCGTCCCCCTGCCCCGTGCCCAAGCGCAGATCAGGCCGTCTGAAAACCAAAA
CCTGCCCGACCTCAAAGACGTCAAAGGCCAGCACACCGCCCGCCTCGCCCTCGAAATCGCCGCCGCCGGCGGCCACAGCC
TCCTGATGATGGGCCCGCCCGGCACCGGCAAATCCATGCTCGCCCAACGCCTGCCCTCCATCCTGCCGCCGCTCACCGAC
GACGAACTGATCGAAGTGTGGACGGTGCAGTCGCTGCTGCCGCACCACACCCAGAATTTCAGCCGCAGCCGCCCCTGCAA
AAGCCCCCACCACTCCGCCAGCGCGGTCGCCCTCGTCGGCGGCGGCTCCGACCCCCGCCCCGGCGAAATCTCCCTCGCCC
ACAAAGGCGTGCTCTTTCTCGACGAATTGCCCGAGTTCGACCGCAAAGTGCTCGAAGCCCTGCGCGAACCCCTCGAAAGC
GGCGAAATCCACATCTCCCGCGCCGCCCGCCAGGCCGTGTTCCCCGCCGACTTCCAACTCGTCGCCGCCATGAACCCCTG
CCCCTGCGGCTACCACGGCCACCCGTCCAAACCCTGCCGCTGCACGCCCGACGCGATACAGCGTTACCGCAGCAAAATCT
CAGGCCCGCTTATCGACCGCATCGACCTCGTCATCGAAGTGCCCGCCCTCCCCGCTGCCGACCTCGTGCAGGCCGCGGCG
GGCGAACCCAGCGCGGCCGTGCTCGAACGCGTCCTTGCCGCCCGCGAACGCCAAAACGCGCGGCAGGGCAAGCTCAACCG
CGCCCTCAGCCCCACCGAGCTGGACACCGCCGCCGGCATATCCGCCGAAGCCAGGGAAACCCTCGGCGGCATACTGGAAA
AACTCTCCCTCTCCGCCCGCAGCTTCCACCGCATCATGCGCACCGCCCGCACCATCGCCGACCTTTCCGGCGACGACACA
GTAAACCGCAGCCACATCCTGCGCGCCGCCGCCCTGCGCCGCGCCCTGTAA

Domains

Predicted by InterproScan.

Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C)

(401-493)

Magnesium chelatase, subunit ChlI (Mg_chelatase)

(190-393)

Subunit ChlI of Mg-chelatase (ChlI)

(21-142)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB F2BDH9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comM Vibrio cholerae strain A1552

53.629

100

0.536
  comM Vibrio campbellii strain DS40M4

52.121

99.798

0.52
  comM Haemophilus influenzae Rd KW20

50

100

0.504
  comM Glaesserella parasuis strain SC1401

49.004

100

0.496
  comM Legionella pneumophila str. Paris

46.521

100

0.472
  comM Legionella pneumophila strain ERS1305867

46.521

100

0.472
  RA0C_RS07335 Riemerella anatipestifer ATCC 11845 = DSM 15868

43.2

100

0.435