Detailed information    

insolico Bioinformatically predicted

Overview

Name   dprA   Type   Machinery gene
Locus tag   H3L94_RS11215 Genome accession   NZ_CP059567
Coordinates   2282954..2284120 (-) Length   388 a.a.
NCBI ID   WP_182122053.1    Uniprot ID   A0A7D7NA13
Organism   Neisseria shayeganii strain DSM 22244     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 2277954..2289120
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H3L94_RS11190 (H3L94_11190) - 2278192..2278443 (-) 252 WP_009119210.1 YfhL family 4Fe-4S dicluster ferredoxin -
  H3L94_RS11195 (H3L94_11195) rsmD 2278554..2279132 (-) 579 WP_182122050.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  H3L94_RS11200 (H3L94_11200) - 2279244..2279894 (-) 651 WP_182122051.1 phosphatase PAP2 family protein -
  H3L94_RS11205 (H3L94_11205) topA 2280035..2282329 (-) 2295 WP_182122052.1 type I DNA topoisomerase -
  H3L94_RS11210 (H3L94_11210) - 2282468..2282932 (-) 465 WP_009119215.1 DUF494 domain-containing protein -
  H3L94_RS11215 (H3L94_11215) dprA 2282954..2284120 (-) 1167 WP_182122053.1 DNA-processing protein DprA Machinery gene
  H3L94_RS12910 - 2284192..2284323 (-) 132 Protein_2308 lipoprotein signal peptidase -
  H3L94_RS11220 (H3L94_11220) - 2284419..2284754 (-) 336 WP_280525470.1 zinc ribbon domain-containing protein YjdM -
  H3L94_RS11225 (H3L94_11225) - 2284875..2286221 (+) 1347 WP_182122054.1 pitrilysin family protein -
  H3L94_RS11230 (H3L94_11230) ruvC 2286319..2286855 (+) 537 WP_009119219.1 crossover junction endodeoxyribonuclease RuvC -
  H3L94_RS11235 (H3L94_11235) - 2286950..2287840 (+) 891 WP_182122055.1 DMT family transporter -
  H3L94_RS12730 - 2287867..2288093 (+) 227 Protein_2313 ATP-dependent exonuclease -

Sequence

Protein


Download         Length: 388 a.a.        Molecular weight: 39989.84 Da        Isoelectric Point: 5.7975

>NTDB_id=470788 H3L94_RS11215 WP_182122053.1 2282954..2284120(-) (dprA) [Neisseria shayeganii strain DSM 22244]
MAMQGGAVDKESERLAWIRLALMPYIGAEAFARLLAHYGSAAAVWAAEDEVAAVLPTQAARTAWRTRRHEAEAAADAACR
WAAQENCALLLSCDAGFPVMLGEGLTPPPLLFVRGDSRLLSAAGVAVVGSRHATPQAMRVAADFGAALAERGLVTVSGMA
AGIDTAAHEGALRQGGGTVAVWGTGIDRVYPTANKALAHRIAEHGCIISEFPLGTRPLAANFPRRNRLIAALAHAVLVVE
AAVESGSLITARLAAEMGREVFAVPGSIDNPHSKGCHALIKQGAKLTESLADILEECPLLAEPTGLPVQAGGQMALAPPL
PESAGTEGSPASAEGGSALLAAMGYAPVHPDTLAQTLGIPAADVYAEITLLEIEGRVAPLPGGRYQRV

Nucleotide


Download         Length: 1167 bp        

>NTDB_id=470788 H3L94_RS11215 WP_182122053.1 2282954..2284120(-) (dprA) [Neisseria shayeganii strain DSM 22244]
ATGGCAATGCAAGGAGGAGCCGTGGATAAGGAAAGCGAACGCCTGGCTTGGATCAGACTGGCTTTGATGCCGTATATCGG
CGCCGAAGCCTTTGCCCGCCTGTTGGCGCATTACGGTTCGGCTGCCGCGGTGTGGGCGGCCGAAGATGAGGTGGCCGCCG
TGCTGCCCACCCAGGCGGCCCGCACGGCGTGGCGGACGCGCCGGCATGAAGCGGAAGCGGCGGCCGATGCGGCCTGTCGG
TGGGCGGCGCAGGAGAATTGCGCTTTGTTGTTGTCCTGCGATGCCGGTTTCCCCGTCATGCTGGGCGAAGGGCTGACCCC
GCCGCCGCTGTTGTTTGTGCGCGGCGACAGCCGTTTGTTGTCCGCCGCCGGCGTGGCGGTGGTCGGCAGCCGCCATGCCA
CGCCGCAGGCCATGCGGGTGGCGGCCGACTTTGGTGCCGCTTTGGCCGAGCGGGGCTTGGTCACGGTATCGGGCATGGCC
GCCGGCATCGATACCGCCGCCCACGAAGGCGCTTTGCGGCAGGGCGGCGGCACGGTGGCGGTGTGGGGCACGGGCATCGA
CCGCGTGTATCCCACCGCCAACAAGGCGCTGGCGCACCGCATTGCCGAACACGGCTGCATCATTTCCGAGTTTCCGCTGG
GCACCCGGCCGCTGGCGGCCAATTTCCCGCGCCGCAACCGTTTGATTGCCGCGCTGGCCCATGCGGTGTTGGTGGTGGAG
GCCGCGGTGGAGTCGGGTTCTTTAATTACCGCGCGACTGGCGGCGGAAATGGGGCGGGAAGTATTTGCCGTGCCCGGCTC
CATTGATAATCCGCACAGCAAAGGCTGCCATGCGCTCATCAAGCAGGGCGCCAAGCTCACCGAAAGCCTGGCCGATATTT
TGGAAGAATGTCCGCTGTTGGCCGAGCCGACAGGCTTGCCGGTGCAGGCCGGCGGGCAGATGGCCCTTGCGCCGCCGCTG
CCGGAAAGTGCCGGGACGGAGGGTTCGCCGGCGTCGGCTGAAGGCGGCAGTGCTTTGTTGGCGGCCATGGGCTATGCGCC
GGTGCATCCCGACACTTTGGCGCAAACACTTGGCATTCCCGCCGCAGATGTGTATGCTGAAATAACCTTGCTGGAAATCG
AAGGCCGCGTGGCGCCTTTGCCCGGCGGCCGCTACCAGCGGGTGTGA

Domains

Predicted by InterproScan.

DNA recombination-mediator protein A (DNA_processg_A)

(83-287)

DprA winged helix domain (DprA_WH)

(329-383)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7D7NA13

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Neisseria gonorrhoeae strain FA1090

58.163

100

0.588
  dprA Neisseria meningitidis strain C311

56.927

100

0.582
  dprA Neisseria meningitidis MC58

56.927

100

0.582
  dprA Neisseria gonorrhoeae MS11

57.653

100

0.582
  dprA Vibrio cholerae strain A1552

37.563

100

0.381