Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   H2677_RS14800 Genome accession   NZ_CP059558
Coordinates   3197448..3198575 (+) Length   375 a.a.
NCBI ID   WP_075695884.1    Uniprot ID   A0AAW5RAM0
Organism   Acinetobacter junii strain YR7     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 3192448..3203575
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H2677_RS14780 (H2677_14775) - 3193007..3195103 (-) 2097 WP_212638832.1 TonB-dependent copper receptor -
  H2677_RS14785 (H2677_14780) - 3195177..3195614 (-) 438 WP_212638833.1 DUF2946 family protein -
  H2677_RS14790 (H2677_14785) def 3195636..3196166 (-) 531 WP_004905508.1 peptide deformylase -
  H2677_RS14795 (H2677_14790) tsaP 3196287..3197438 (+) 1152 WP_004905510.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  H2677_RS14800 (H2677_14795) dprA 3197448..3198575 (+) 1128 WP_075695884.1 DNA-processing protein DprA Machinery gene
  H2677_RS14805 (H2677_14800) - 3198613..3199182 (+) 570 WP_199956066.1 Sua5/YciO/YrdC/YwlC family protein -
  H2677_RS14810 (H2677_14805) - 3199577..3200497 (-) 921 WP_212638834.1 DMT family transporter -
  H2677_RS14815 (H2677_14810) - 3200601..3201266 (-) 666 WP_171495825.1 TetR/AcrR family transcriptional regulator -
  H2677_RS14820 (H2677_14815) - 3201396..3202616 (+) 1221 WP_212638835.1 MFS transporter -
  H2677_RS14825 (H2677_14820) - 3202632..3203405 (+) 774 WP_212638836.1 AraC family transcriptional regulator -

Sequence


Protein


Download         Length: 375 a.a.        Molecular weight: 42308.27 Da        Isoelectric Point: 7.1915

>NTDB_id=470611 H2677_RS14800 WP_075695884.1 3197448..3198575(+) (dprA) [Acinetobacter junii strain YR7]
MLNQLSPRHYHTVLVWYLVQHSLSSFHKILKHFGSCEQATQSHRFSEWYQLGLHANHLKRLEEFQSTQGQKQFEQIVQLI
LKHCDFIVTPHDIDYPKQLIPYADHPPILFGQGHLQALLQPQIALVGSRKPSPHGRQVAYDFAYYLSEKGFYITSGLAHG
IDEAAHRGGLAHHRSIAVTGTGLDTVYPTQNKPLAQQIAQSGAIITEFLPTTLPLQQHFPRRNRIVSGLSLGVLVVEAAL
KSGSLITANEAANQGKMVFAIPGHIYSEYHQGCHQLIREGAVLVDHPEQIIEDLALPTHWQTQQHTKDAVEQHSTLPPHL
ISLYQNLDWIGQDLDLLSQRYPAPISEITSQLMELELLGLCIQQGGRYLRCRPIH

Nucleotide


Download         Length: 1128 bp        

>NTDB_id=470611 H2677_RS14800 WP_075695884.1 3197448..3198575(+) (dprA) [Acinetobacter junii strain YR7]
ATGTTGAATCAATTATCACCCCGCCACTACCATACCGTGTTGGTGTGGTATTTGGTTCAACATTCCCTATCCAGCTTTCA
CAAAATTCTGAAACATTTTGGGAGTTGTGAACAAGCAACACAAAGCCACCGATTCTCTGAGTGGTATCAACTCGGTTTAC
ATGCAAACCATCTAAAACGTTTAGAAGAATTTCAAAGTACACAAGGTCAAAAACAATTTGAACAGATAGTTCAACTGATT
TTGAAGCACTGTGACTTTATCGTGACGCCACACGATATTGACTATCCCAAACAACTCATACCTTATGCAGACCATCCACC
CATATTATTTGGTCAAGGTCATCTTCAAGCTTTACTGCAACCGCAAATTGCATTAGTGGGGAGCCGCAAACCTAGTCCAC
ATGGTCGCCAAGTGGCTTATGATTTTGCTTATTACCTTAGTGAGAAAGGATTTTATATTACCAGTGGTCTTGCACATGGG
ATTGATGAAGCTGCTCATCGCGGTGGCTTAGCACATCATCGAAGTATCGCTGTCACAGGTACTGGGTTAGATACCGTTTA
TCCCACTCAAAATAAACCATTGGCACAACAAATTGCTCAATCAGGTGCCATCATCACAGAGTTTCTTCCTACGACACTCC
CATTACAACAACATTTTCCACGACGAAATCGGATTGTTAGTGGCTTAAGTTTAGGTGTCTTAGTGGTTGAAGCAGCACTA
AAAAGTGGATCGTTGATTACGGCGAATGAAGCAGCCAATCAAGGTAAAATGGTATTTGCTATCCCTGGTCATATTTACAG
TGAATACCATCAAGGCTGTCATCAACTTATTCGTGAAGGGGCTGTTTTGGTCGATCATCCTGAACAGATTATTGAAGATT
TAGCATTACCTACACATTGGCAGACCCAACAACACACTAAAGATGCTGTAGAACAGCACTCAACACTTCCACCACATTTG
ATTAGCTTGTATCAGAATTTAGATTGGATTGGACAGGATTTAGATTTACTCAGCCAACGCTATCCAGCACCGATCTCTGA
AATCACATCTCAATTAATGGAATTAGAGTTACTAGGTTTGTGCATACAACAAGGTGGTCGCTATTTACGTTGTCGTCCAA
TCCATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii D1279779

72.8

100

0.728

  dprA Acinetobacter baumannii strain A118

71.733

100

0.717

  dprA Acinetobacter baylyi ADP1

69.474

100

0.704

  dprA Vibrio cholerae strain A1552

42.655

94.4

0.403