Detailed information    

insolico Bioinformatically predicted

Overview

Name   tsaP   Type   Machinery gene
Locus tag   H2677_RS14795 Genome accession   NZ_CP059558
Coordinates   3196287..3197438 (+) Length   383 a.a.
NCBI ID   WP_004905510.1    Uniprot ID   S7XRZ8
Organism   Acinetobacter junii strain YR7     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3191287..3202438
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H2677_RS14775 (H2677_14770) - 3192199..3192960 (+) 762 WP_212638831.1 hypothetical protein -
  H2677_RS14780 (H2677_14775) - 3193007..3195103 (-) 2097 WP_212638832.1 TonB-dependent copper receptor -
  H2677_RS14785 (H2677_14780) - 3195177..3195614 (-) 438 WP_212638833.1 DUF2946 family protein -
  H2677_RS14790 (H2677_14785) def 3195636..3196166 (-) 531 WP_004905508.1 peptide deformylase -
  H2677_RS14795 (H2677_14790) tsaP 3196287..3197438 (+) 1152 WP_004905510.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  H2677_RS14800 (H2677_14795) dprA 3197448..3198575 (+) 1128 WP_075695884.1 DNA-processing protein DprA Machinery gene
  H2677_RS14805 (H2677_14800) - 3198613..3199182 (+) 570 WP_199956066.1 Sua5/YciO/YrdC/YwlC family protein -
  H2677_RS14810 (H2677_14805) - 3199577..3200497 (-) 921 WP_212638834.1 DMT family transporter -
  H2677_RS14815 (H2677_14810) - 3200601..3201266 (-) 666 WP_171495825.1 TetR/AcrR family transcriptional regulator -

Sequence

Protein


Download         Length: 383 a.a.        Molecular weight: 41829.95 Da        Isoelectric Point: 9.0745

>NTDB_id=470610 H2677_RS14795 WP_004905510.1 3196287..3197438(+) (tsaP) [Acinetobacter junii strain YR7]
MKKVLNGIHSFHALGLKKQLIAVAICAGLGMTVNITHAASPNVSPPSVKAGAPHVYVVKKGDTLWDISGKFLSKPWRWPE
IWASNKHVKNPHWIYPGDRLLLCSLNGKPLIGKDEGDGCDGIIRRYTGGGTTLRPQVRIEALNNSVPVIPLAHIQQWLER
SSVLPADAIANTPYILGTADNRVLAGKGQSVYVRGQGLENGQRYGVYREGEPYIVVDEQGKKQNLGVELLQVASGVAVRN
ENDITTVELTDSYNGEVRRGDRVMLEQEAMLPTLFYPIDAKQVRDGGKVIRVLGSIGTAAKNGVVTVDRGTADGVEIGQV
FSTYQEGEIVQDPKTKEKVKLPGQYVGSLMIFKSFDRISYAYVLESELPIKVGSNIQPPRLDD

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=470610 H2677_RS14795 WP_004905510.1 3196287..3197438(+) (tsaP) [Acinetobacter junii strain YR7]
ATGAAAAAGGTTTTAAACGGCATACACTCATTTCATGCCTTGGGGTTAAAAAAACAACTGATTGCTGTTGCCATCTGTGC
AGGATTAGGCATGACGGTAAATATAACGCATGCAGCAAGCCCTAATGTTAGCCCACCCTCTGTCAAAGCTGGGGCACCAC
ATGTCTATGTAGTGAAAAAAGGCGATACCCTTTGGGATATCTCAGGCAAGTTTTTAAGTAAACCATGGCGCTGGCCAGAA
ATTTGGGCAAGCAATAAACACGTTAAGAATCCTCACTGGATTTATCCAGGTGACCGCTTACTACTCTGTAGTTTGAATGG
CAAACCGTTAATCGGTAAAGATGAAGGTGACGGCTGTGACGGTATTATTCGTCGTTATACAGGTGGTGGAACAACTTTAC
GTCCGCAAGTACGTATCGAAGCATTGAACAATAGTGTGCCAGTTATTCCATTGGCTCATATTCAACAATGGTTAGAACGT
AGTTCAGTATTACCAGCGGATGCAATTGCGAATACCCCTTATATCTTAGGCACAGCTGACAATCGCGTGCTTGCAGGCAA
AGGACAAAGTGTTTACGTCCGTGGTCAAGGTCTAGAAAATGGTCAGCGTTATGGCGTTTACCGTGAAGGTGAACCTTACA
TCGTTGTCGATGAGCAAGGCAAAAAGCAAAACCTAGGTGTTGAATTACTTCAAGTCGCATCTGGTGTTGCTGTGCGCAAT
GAAAACGACATTACTACGGTTGAACTCACTGATAGCTATAACGGCGAAGTTCGTCGTGGTGATCGCGTGATGCTTGAACA
AGAGGCAATGTTACCAACCTTGTTCTATCCTATCGATGCAAAACAAGTACGCGATGGCGGTAAAGTGATTCGTGTATTAG
GATCGATTGGTACAGCCGCAAAAAATGGTGTTGTCACTGTTGATCGTGGTACTGCTGATGGCGTTGAAATTGGTCAAGTC
TTTAGCACCTACCAAGAGGGTGAGATCGTACAAGATCCAAAAACTAAAGAGAAAGTTAAATTACCTGGACAATATGTGGG
TAGCTTGATGATCTTCAAGAGTTTTGATCGTATCAGCTATGCCTACGTTTTAGAAAGTGAACTACCAATCAAGGTCGGTT
CAAACATCCAACCACCACGCTTGGATGACTAA

Domains

Predicted by InterproScan.

LysM domain (LysM)

(56-101)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB S7XRZ8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tsaP Acinetobacter baumannii D1279779

72.917

100

0.731